Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03137 ATGTGGACAGTTCTGCGATCTCGAGCTTGTTCTTCGCTTTGTCCATCAAACCCACAGCCCCTTCTTCAATCATGGAAGCTAGGGTTTTCCTCTCTATCCACTACTGTTGATGCCGGCATCAGTAATTGTACCCTAGATCTGCAAGAGATCGAGAAGATTCTTACGGACGTTAAAGCTGACGACGTGAAGATAATTCCAGTTCCCAAGCACAACGATTGGGCTGATTTCATGGTACTTGCCACTGGTAGATCCACCTGGCATGTCAAGAATATTGCTCAAGCCCTGATTTACAAGGCTAAGCAGAAGCAGCAAGGAGTTGAGCGAATGACGCTGCCTAGTGTGCAAGGACAAAATGAGGGCAAGTGGATCGTCATTGACTCTGGTAAAGTGATAGTTCATGCCCTCGATGAAAATGCCAGGGCGTACTACAATTTGGAAGGTCTTTGGACCCGCGGGACATTGCAAAATGAACCTGTTGAGGATTTACAAAAAGCTTTGGTGAAGGTCCGGCGGAAAAACAATTCCAAGAAACCTGCCCAAAGAAATGCCTAA 552 0.4656 MWTVLRSRACSSLCPSNPQPLLQSWKLGFSSLSTTVDAGISNCTLDLQEIEKILTDVKADDVKIIPVPKHNDWADFMVLATGRSTWHVKNIAQALIYKAKQKQQGVERMTLPSVQGQNEGKWIVIDSGKVIVHALDENARAYYNLEGLWTRGTLQNEPVEDLQKALVKVRRKNNSKKPAQRNA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03137 183 Hamap Ribosomal silencing factor RsfS [rsfS]. 35 150 IPR004394 -
Trre5g03137 183 Gene3D Beta Polymerase, domain 2 44 163 IPR043519 -
Trre5g03137 183 Pfam Ribosomal silencing factor during starvation 49 149 - -
Trre5g03137 183 SUPERFAMILY Nucleotidyltransferase 48 155 IPR043519 -
Trre5g03137 183 FunFam Mitochondrial assembly of ribosomal large subunit 1 45 162 - -
Trre5g03137 183 NCBIfam ribosome silencing factor 47 149 IPR004394 -
Trre5g03137 183 PANTHER IOJAP SUPERFAMILY ORTHOLOG 42 163 IPR004394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03137 Trre-Chr5 26782360 26785435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03137 - - gmx:100500386 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03137 5 26782360 26785435 Trre5g03137 5 26782360 26785435 ECH