LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g03123	ATGGGGTTTCTAAGGTTGATAAGAAGGTATAATTACCCCTTCAAAGATAAAACTCGAAATAGAGCATACTTAATTCAGCATATGCAAAGAAGAGGCTTCTCAAAAGAACAAGTGTTCAAGGGCGATGATGCAGTGCTTCCAGTTCTGATCATTGGTGCAGGGCCTGTGGGTCTTGTTCTCTCTATTCTCCTCACAAAGTTAGGTATTAATTGCACAGTTTTGGAGAGAAACAAGGCATTTTCTAAACATCCACAAGCACACTTCATCAACAATCGATCCATGGAGATATTCCGCAAGATTGATGGCCTTGTTGAAGAGATCCAAAGGTCCCAACCACCAGTAGACTTATGGAGAAAGTTCGTGTATTGCACTTCCCTTTCTGGTTCAATTCTTGGATCTGTAGATCACATACAACCTCAAGATCTTGAGCATGTTATCAGCCCAGTCTCTGTAGCACACTTCTCGCAGTACAAGTTAACCATGTTACTACTCATGCAACTTGAAAATCTAGGCTTCCAAACATGCGCACCTGAAAGCTCAGAAGGAAATAAGCAGTTTCATGAAAAGAAAATATTGATGGGTCATGAGTGTGTATCCGTTGATGCCAGCAATGACTTCATAACCGTAACTGCATCTTCTGTAAATAATGGGAAGCAAGTAGAAAAGAATATCCGTTGTAATATCCTTATTGGTGCAGACGGAGCAGGAAGTACTGTGAGAAAGCTTGTAGGAATAGATATGAGAGGTGAGAAAGACTTGCAAAAGCTTGTCAGTGTCCATTTTCTTAGCAAACGCCTTGGACAATTTTTGCTTAAGGAAAATCCCGGCATGCTCTTCTTTATCTTTAATACTGAAGCAATTGGGGTCCTTGTTGCTCATGATCTCAGGCAAGGAGAATTTGTTTTGCAGATACCATTTTATCCACCCCAGCAAACAATTGAGGATTTCAGTCCAAAGGCATGTGAGAAGTTAATCAACAAACTTGTTGGTCGGGAGTTTGGAGATGTGGATGTAATTGATATAAAGCCATGGATTATGCATGCCGAAGTTGGTGAGAGGTTTGTATGTTGTGGCAACCGAGTTATACTTGCTGGTGATGCTGCTCATCGATTTCCACCTGCTGGTGGATTTGGAATGAATACTGGAATTCAGGATGCACATAATCTTGCCTGGAAAGTTGCTTCTGTGATAAAGGGTATTGCCCCAACTTCAATGCTAAATACCTACGACTTGGAGCGTAGACCAATCTCTGTATTTAATACAAGGTTAAGTCTGGAAAACTATAGAGCTGCCATGTCTGTTCCTGCTACACTCGGTCTCAATCCAACTGTTGCAAACACAGTTCATAAAGTTATTATTAACGGGGTTGGTTCCATCTTACCATCTGGATTGCAGAGGCTAGCTTTGGATGGAATTTTTGCTATAGGCCGTGCACAACTCTCTGAATCTGTTCTAAATGAAAGTAACCCCCTTGGATCCTCAAGGTTGGCTAAGCTAAGACATATATTTGAAGAAGGGAAAAGCCTTCAACTTCAGTTCCCTGCTGAAGATCTTGGTTTTAGGTACCTTCAAGGTGCAATTATGCCAGATAGTAGTGTTGTTGAGAGTTCTCCACAAGTACCCACAGGTCGTCGGAGGGACTATATCCCTTCAGCACAACCAGGATGTAGATTACCTCATATGTTTGTGAGAGTAAACCCAATAAGCAAGGAGATGGTTTCTACGCATGATCTTGTGTCTGGAGATAAAGTTGAGTTCGTTCTCATCATAGCACCTGTAAAGGAATCTTATCATTTAGCTCGTGAAGCATTCAAGGTGGCCGAGGAACGACAAGTGTCTCTCAAAGTGTGTGTTTTTTGGTCTATGGATTCTGGTGTAGGATTTGATAAAGGAAGTAAAGAAGCATTATCACCTTGGAAGAATTATGCAGATGTTGTTGAAGTTTGTTCAACAACTACAAATTGGTGGGATATGTGTAATATGACAAACAGAGGGGCTATTTTAGTTAGACCCGATGAACATATTGCATGGCGTACAATTTCACGACTTGCTGGGGATCCTAGGGCGGAAATGCAGAGGGTTTTTTCTTCTATACTTAGAGCACACTAA	2109	0.4135	MGFLRLIRRYNYPFKDKTRNRAYLIQHMQRRGFSKEQVFKGDDAVLPVLIIGAGPVGLVLSILLTKLGINCTVLERNKAFSKHPQAHFINNRSMEIFRKIDGLVEEIQRSQPPVDLWRKFVYCTSLSGSILGSVDHIQPQDLEHVISPVSVAHFSQYKLTMLLLMQLENLGFQTCAPESSEGNKQFHEKKILMGHECVSVDASNDFITVTASSVNNGKQVEKNIRCNILIGADGAGSTVRKLVGIDMRGEKDLQKLVSVHFLSKRLGQFLLKENPGMLFFIFNTEAIGVLVAHDLRQGEFVLQIPFYPPQQTIEDFSPKACEKLINKLVGREFGDVDVIDIKPWIMHAEVGERFVCCGNRVILAGDAAHRFPPAGGFGMNTGIQDAHNLAWKVASVIKGIAPTSMLNTYDLERRPISVFNTRLSLENYRAAMSVPATLGLNPTVANTVHKVIINGVGSILPSGLQRLALDGIFAIGRAQLSESVLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLQGAIMPDSSVVESSPQVPTGRRRDYIPSAQPGCRLPHMFVRVNPISKEMVSTHDLVSGDKVEFVLIIAPVKESYHLAREAFKVAEERQVSLKVCVFWSMDSGVGFDKGSKEALSPWKNYADVVEVCSTTTNWWDMCNMTNRGAILVRPDEHIAWRTISRLAGDPRAEMQRVFSSILRAH	702

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g03123	702	Pfam	FAD binding domain	47	417	IPR002938	GO:0071949
	Trre5g03123	702	Gene3D	-	114	353	-	-
	Trre5g03123	702	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	391	409	-	-
	Trre5g03123	702	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	409	425	-	-
	Trre5g03123	702	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	225	240	-	-
	Trre5g03123	702	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	358	373	-	-
	Trre5g03123	702	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	47	69	-	-
	Trre5g03123	702	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	373	389	-	-
	Trre5g03123	702	PANTHER	TRK SYSTEM POTASSIUM UPTAKE PROTEIN	33	695	-	-
	Trre5g03123	702	Gene3D	-	47	416	IPR036188	-
	Trre5g03123	702	SUPERFAMILY	FAD/NAD(P)-binding domain	47	436	IPR036188	-
	Trre5g03123	702	Gene3D	-	515	701	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g03123	Trre-Chr5	26572915	26577713	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre5g03123	-		-	gmx:100794253	1220.68