Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03110 ATGTTTGGAGCTCAATCTTCATCTTCTCTTTTCGGAACCCCTTCTTCAACCCCAGCATTCGGCACTCCAACTTTCGGTACTCCATCTTCCACTCCAGCATTCGGTACCCCAGGGTTTGGAACCCCATCTTCAACCCCTGCTTTTGGAGCTTCTTCTACTCCCGCTTTCGGCGGTTCTTCCCTTTTCTCCTCACCTTTCTCTTCTCAACAACAACCGCAACAGCAGCAGCAACAACAACAGTCTTCACTTTTTCAACAATCGCCTTCTACTGGTTTTGGATTTCAGAATTCTCTTACAACGCCGCAACCTGCGTCGTTCCCAAATTCTCAATTGACTACTCAAATGGCTAATGTAGCTCCAGTTCCGTTCTCTCTAGCCGATCGCGATATTCAAGCAATCCTTGATTCTTATAAAGAAGATGCTGGAAACTCCAAGTATGCTTTTAAGCATTTGTTATTCAGTGTAACAGATCCACAGTTTAGGGTGAAGCCTGCTGGTGTTTCAGATATCATGTGGGCGGAAGCAATGGGGAAGCTTGAGGGTATGGAAAGTGCTGATAGAGAACGTCTATGGCCACAACATGTTCAAGGTTTTAAGGATCTTTCCCAACGCCTTAAGCTCCAAGATGAAGTCATTGTCTCTGATGCAGAGAGATTAAGTGTAACCCAAAGCAATGTTAAAATGCTCCAAAGACATTTTCAAGCTGATACTCTTCCTTGGATTCAAAGGCTGAAACAGAAAGAACAGATTCTTCAGCAACGTATTTTAAGAGTGATGAGAATAGTGGAGGCGTTGGAGGGAAAAGGCTGCCGTATTCCCTTAACAAAAGGGGAAGCTGAACTTGCTGAGAAATTAGCCACAATAACTAGACAGCTTAAAGGATCTGGAGCGGAATTATCTAGAAGGGTACAAAATCTACTCGGTGTATCTCGTGTCAAGGCTAATAGCAATGGATTTGGCTACTCCGTTCATCTTCCGGGCTCAACCAAAATTCATGATCAGAGTCTGGCTAACCTGCAGGAGGTTTTACAACAGCAGATGGATGCCATAGCAAGACTTGGCAGTGTTATGAAGCGAGATGCACGGGATATGGAGATTATGATGGCTGAGGACACAGGAATGACAGAAAATGGACATTTAATGTAA 1146 0.4424 MFGAQSSSSLFGTPSSTPAFGTPTFGTPSSTPAFGTPGFGTPSSTPAFGASSTPAFGGSSLFSSPFSSQQQPQQQQQQQQSSLFQQSPSTGFGFQNSLTTPQPASFPNSQLTTQMANVAPVPFSLADRDIQAILDSYKEDAGNSKYAFKHLLFSVTDPQFRVKPAGVSDIMWAEAMGKLEGMESADRERLWPQHVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRILRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLGVSRVKANSNGFGYSVHLPGSTKIHDQSLANLQEVLQQQMDAIARLGSVMKRDARDMEIMMAEDTGMTENGHLM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03110 381 MobiDBLite consensus disorder prediction 1 109 - -
Trre5g03110 381 PANTHER NUCLEOPORIN P54 1 375 IPR024864 GO:0005643
Trre5g03110 381 Pfam Nucleoporin complex subunit 54 163 307 IPR025712 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03110 Trre-Chr5 26390152 26394151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03110 K14308 - gmx:100797030 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03110 5 26390152 26394151 Trre5g03110 5 26390152 26394151 ECH