Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03082 ATGGTTGTTGCACAGAAACTCAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTGACAAGGAACCTGCTCCGAATTGCCATATTCAACATTAGCTATATCAGAGGACTATTTCCTGAGAAGTACTTCAATGACAAGTCTGTTCCTGCGTTAGAGATGAAGATCAAAAAGCTGTTGCCAGTGGATGCTGAGTCTCGTAGACTGATCGATTGGATGGAGAAAGGTGTGTATGATGCCTTACAGAAGAAATACCTGAAGACGCTTCTATTCTGTGTGTGCGAAGCAGTGGATGGACCGATGATTGAGGAATATGCATTTTCCTTTAGCTATTCGGATTCTGAGAAGCAAGAGGTTTCTATGAATATCAACCGCACCGGAAGCAAAAAGCAGGGGGGATCCTTCAAGTGTAACTCGACTACTGATATTACCCCCCAGCAGATGAGGAGTTCTGCATGTAAAATGATAAGGACTCTCGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAACGCACCATTCTGATGAAGCTTCTCTACTATGATGATGTAACGCCTGCGGATTATGAGCCTCCTTTCTTCAGGGGCTGCACTGAAGAAGAAGCTAATCATCCTTGGGTGAAAAATCCATTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCATTTTGTGTTAGCTCTGAAGGTGAAGAGCGTGCTTGACCCTTGTGAGGATGACAATGAGGGAATCCAAGATGATATGAGTGATGACTCCATGCAAAATAATGAGTATTATGATACTGACAGCGAGGTTGATCATTCTCAAGGGAATCAATATATAGTTGCACCCATAGAGAAACAGCAAGAACAGGAAGATAATGGTGAGATTGATGAAGAAAATACCCAGGACCCGGTTGAAGATGAGCAACAATTGGTCCGGATTAAGGAGTGGCTAAACTGTTGTCACCTTGATACCATTGATCTTACTGATGTTCTATCAAATTTTCCAGATATCTCAGTGGTTCTGACTGAAGAGATCATGGACAACCTTGTCAAGGAAGGTGTGCTATCAAAAATAGGGAACGACACCTATGCTATTATTAAGGACAAGAAATCTGAGTATGATTTCACCATTGTGAAAGAAGAAATTGATGGTAAACTGCCTCCAGTCCTTGATAGAGCTTTGTCTGCTGAAGATCTCATATACATGAAGGCTCTCTACCATACTCTTCCAATGGCATATGTGTCGGTCACAAAGCTTCAAAGCTCGTTCCAGGGAGAAGTAAGCCAAGCAGCTGCAAGAAAGATAATTGACAAAATGACCCGGGATGGGTTTGTTGAGCCTAAAGGCAACAAAAGACTAGGAAAACGTGTGATCCATTCTGAGTTGACTGAGAGAAAATTCATTGAGGTCCAAAAAGCTCTAGGTGCTGCTGAAGCTATGGATGTTGATCACTGTGAACCAAATAGCAAGTCCAAACAAGCTGGTTACCGTATAAATGGAAGTAACCGCGACATCTCAACATGTGGTGTTCTCCACTCCATTGGATCAGATTTAACAAGAATGAAAGTGACATCTGATACAAATAATACCGACTCCATGAGTGGACTGAAAATGCTAAAGGCAAAAGAGACAGGGAACACCCCAACAAGCAGGCCAGTTGCTTCAAGAGAAAGTTTTGCCCATGGGAAAGAGAACAGCACAGCAAATGGAAATGGGATTGCAAATGAAGGCGACGCAGCTGATACAATCATCTGCAGCAAGCCGTCCCAGGAGAAGCGCCCCAGGAAGACAAGCGCGGTCAAGGAACCTATCCATCAAAATGTGAAGCGTCAGAGATCTCAGGCTCCATGA 1836 0.4336 MVVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLLPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSEKQEVSMNINRTGSKKQGGSFKCNSTTDITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTEEEANHPWVKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIQDDMSDDSMQNNEYYDTDSEVDHSQGNQYIVAPIEKQQEQEDNGEIDEENTQDPVEDEQQLVRIKEWLNCCHLDTIDLTDVLSNFPDISVVLTEEIMDNLVKEGVLSKIGNDTYAIIKDKKSEYDFTIVKEEIDGKLPPVLDRALSAEDLIYMKALYHTLPMAYVSVTKLQSSFQGEVSQAAARKIIDKMTRDGFVEPKGNKRLGKRVIHSELTERKFIEVQKALGAAEAMDVDHCEPNSKSKQAGYRINGSNRDISTCGVLHSIGSDLTRMKVTSDTNNTDSMSGLKMLKAKETGNTPTSRPVASRESFAHGKENSTANGNGIANEGDAADTIICSKPSQEKRPRKTSAVKEPIHQNVKRQRSQAP 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03082 611 FunFam Meiosis-specific protein ASY2 5 273 - -
Trre5g03082 611 PANTHER HORMA DOMAIN-CONTAINING PROTEIN 1 4 608 - -
Trre5g03082 611 MobiDBLite consensus disorder prediction 538 568 - -
Trre5g03082 611 MobiDBLite consensus disorder prediction 248 266 - -
Trre5g03082 611 MobiDBLite consensus disorder prediction 285 299 - -
Trre5g03082 611 SUPERFAMILY The spindle assembly checkpoint protein mad2 11 237 IPR036570 -
Trre5g03082 611 Gene3D HORMA domain 5 283 IPR036570 -
Trre5g03082 611 ProSiteProfiles HORMA domain profile. 15 230 IPR003511 -
Trre5g03082 611 Pfam HORMA domain 17 223 IPR003511 -
Trre5g03082 611 MobiDBLite consensus disorder prediction 536 611 - -
Trre5g03082 611 MobiDBLite consensus disorder prediction 281 301 - -
Trre5g03082 611 MobiDBLite consensus disorder prediction 238 266 - -
Trre5g03082 611 MobiDBLite consensus disorder prediction 583 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03082 Trre-Chr5 26030594 26035648 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03082 K12778 - gmx:100792473 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03082 5 26030594 26035648 Trre5g03082 5 26030594 26035648 ECH