Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03075 ATGTACGAATCGGAGAATAACCGGGAAGATTCGGAGCCAACGGCTTTCAGAAGAGCAGAGAAGAACTACAAGCTCTACTACGATAACAATGCTTCATTCAAGAACAAAAAGAATAAAAAACCCAAACCAGTGGACTTAACCGAAGTGCTTGACTTCAGATCAATTCTAGAATGCCATCACCGGAATGGCTTTTATTTTATCCCTGGGGCATTAAGCATAGAGAAACAATGTGATTTGATAAGGGAGAGTTTGATTGATTTTCCGCAGCCACCTAATAGAACAAATCACAATGCTATATATGGTCCTATACACAATTTATTTCTTGCGGCTAAAGAAGGGAAAGTTTTGGCTCAAGAGAACTCTCTAATTACTGCGAATGAACCTAGTCTTGATTCCAATTGTAGGGACGGTGAGGAATGGAAGTTTACCACGGAAAAGGAAGCGTCCTTGAGAAAATGCAAATCTGTTTCTGGTTCTGTTTTGCTGCGAAAGTTGCGATGGAGCACCCTAGGCTTACAGTTTGATTGGTCTAATCGAAATTATAATGTGTCTCTCCAACATAACAAAATCCCTGAAGCACTCTGTGAGCTCGCCAAACAATTGGCAAAACCTGCATTGCCTGCTGGTGTTGAATTCCAGCCTGAAGCTGCAATAGTTAATTACTTCACATCAGGGGACACACTGGGTGGCCACCTTGATGATATGGAAGCAGATTGGAGTAAGCCCATAGTTAGTTTAAGCTTGGGCTGTAAAGCTATTTTTCTTTTGGGAGGAAAATCTAGAGAGGATGCTCCAATTGCAATGTTTCTTCGAAGTGGTGATGTTGTACTCATGGCTGGAGAAGCAAGGGAATGCTTTCATGGTGTTCCTCGGATCTTCACTGATAAAGAAAATGCCGAAATAGACCATCTTGAGACACATCTGACACACGAAGATGATCTTTGTTTCCTAAAATATATCCAAACTTCCAGAATCAACATCAATATCAGACAAGTTTTTTAA 1002 0.4082 MYESENNREDSEPTAFRRAEKNYKLYYDNNASFKNKKNKKPKPVDLTEVLDFRSILECHHRNGFYFIPGALSIEKQCDLIRESLIDFPQPPNRTNHNAIYGPIHNLFLAAKEGKVLAQENSLITANEPSLDSNCRDGEEWKFTTEKEASLRKCKSVSGSVLLRKLRWSTLGLQFDWSNRNYNVSLQHNKIPEALCELAKQLAKPALPAGVEFQPEAAIVNYFTSGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDAPIAMFLRSGDVVLMAGEARECFHGVPRIFTDKENAEIDHLETHLTHEDDLCFLKYIQTSRININIRQVF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03075 333 Gene3D - 115 332 IPR037151 -
Trre5g03075 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 333 IPR005123 -
Trre5g03075 333 FunFam Alpha-ketoglutarate-dependent dioxygenase alkB 123 332 - -
Trre5g03075 333 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 57 332 IPR004574 -
Trre5g03075 333 Pfam 2OG-Fe(II) oxygenase superfamily 138 330 IPR027450 -
Trre5g03075 333 SUPERFAMILY Clavaminate synthase-like 62 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03075 Trre-Chr5 25746883 25750942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03075 K10765 - gmx:100797068 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03075 5 25746883 25750942 Trre5g03075 5 25746883 25750942 ECH