Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03047 ATGGCCACCTCTGTTATACTCTCCACCTCTTTCTCTCCCACCTATTATCCATCCCTTACTTCTTCTTCTTCTTCTTCTTCTTCCATTTCATTCTCCAAACAAAAACTCACTTCGCAATGTTCTTCCTCCAATTTCCTATGTTGGAATTCAAAACCACTACTGTCTTTATCTCGCAGATTCATTGCCCATTCTTCAATAAAGGAAAAAGACTCAACCTTTATAGGCGAGGATTCCGCAGTTTTTGATTTGAAGAAACAGAAAATATCTTCATGGATTTACTTCACCGCTATTTTGGGAGTTGTTCTCTTCATTCTTAATGTCGTGTGGATTAATAATGAAACTGGTTTCGGCAAAGCTTTCGTCGATGCTGTTTCTTCCCTTTCAGATTCTCATGAGGTGGTAATGTTGATCCTAATTCTCATATTTGCCGTTTTTCACAGTGGTATGGCTAGCCTCCGGGATGCTGGTGAGAAACTCATTGGTGAAAGAGCTTTTCGTGTTATTTTTGCAGGGATATCATTGCCTTTGGCTGTCACTACTGTCGTGTATTTTATTAACCACAGATATGATGGACTTCAACTCTGGCAGCTCCAGAGTACTCCTGGGATTCATCAATTTCTGTGGCTTTCCAATTTCATCTCTTTCTTTTTCCTATATCCTTCAACCTTTAATCTTTTAGAGGTTGCAGCAGTTGACAAGCCTAAAGTACATCTATGGGAAACTGGCATCATAAGAATAACCAGACATCCACAGCTAGTTGGGCAGGTAATCTGGTGTCTTGCTCATACGGTTTGGATTGGAAATTCTGTGGCTGTTGCAGCTTCAATTGGCTTAATTTCACATCATCTATTTGGTGCATGGAATGGAGATAGGCGATTGGCTATAAGACATGGAGAAGATTTTGAGATTGTTAAGCGTCGAACAAGTATCATTCCTTTTGCAGCAATACTTGATGGCCGTCAAAGATTACCTGAGGATTTCTACAAGGAGTTTATTCGATTACCGTACTTAGCAATTACTGCAGTAACACTAGGAGCTTACTTTGCACACCCTCTTATGCAGACTGCTAGCTTCAACCTCCATTGGTAG 1089 0.404 MATSVILSTSFSPTYYPSLTSSSSSSSSISFSKQKLTSQCSSSNFLCWNSKPLLSLSRRFIAHSSIKEKDSTFIGEDSAVFDLKKQKISSWIYFTAILGVVLFILNVVWINNETGFGKAFVDAVSSLSDSHEVVMLILILIFAVFHSGMASLRDAGEKLIGERAFRVIFAGISLPLAVTTVVYFINHRYDGLQLWQLQSTPGIHQFLWLSNFISFFFLYPSTFNLLEVAAVDKPKVHLWETGIIRITRHPQLVGQVIWCLAHTVWIGNSVAVAASIGLISHHLFGAWNGDRRLAIRHGEDFEIVKRRTSIIPFAAILDGRQRLPEDFYKEFIRLPYLAITAVTLGAYFAHPLMQTASFNLHW 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03047 362 Gene3D - 126 313 - -
Trre5g03047 362 Pfam NnrU protein 134 353 IPR009915 -
Trre5g03047 362 PANTHER 15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC 22 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03047 Trre-Chr5 25294659 25297195 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03047 K15744 - gmx:100820507 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g03047 5 25294659 25297195 Trre5g03047 5 25294659 25297195 ECH