Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g03027 ATGTACATGAATATCGATTCACAGAACATAGATTTCGAAGACGACGGCGATTCACGGTGGTGTTGTTCTCAAGGCCACCGTTCTTCTCTAAACATACAAACAAACCACGGCGGCACAATCTGTCTCGTGTGTTTCTCCAGTCTCATCTCAAATCCTCTTTCTCCAACTATCCATGTCTCTTACGCTCTCTCTCAGCTCTCTCGTTCTCTCTCAATACCTGAATTCCTTCACTCTATCGTCACTTTTCATCCTCACTTCCTCGTTTCCCCTCTCGTTACCGCTCTCTCCTCTTTCGACGATGAACCTATCGCTGAACAACTTGTTCATCTCATCATCAACCTTTCTGCTTCATCGGATGCTTCCGTTTGCCGTGAATTCGTTGCTAGGGTTTCGGATCGCATTTCTTCTGGTGCTTTAGGTTGGAGTCTACGGCAATTGCACACGCTTCACTGCCTAGGGATTCTTCTGAATTGTGAAAAGGAGGATGATCTCCATGTGCACATCAAAGATATATATGGTCTCAGTTCCATTCTTGTTACAGGTCTTCAATTGCCAAGTGAGGAGATTCGTGGAGAAGTCCTTTTCGTGCTTTACAAACTATATGTTCTTCAGAGTACATCGAATGAGGGTGATGGAAGTGATATGTTGATTCCCTTTTGTCCAAAGCTTTTGTACCTGTTAGGAGATGTTCTCTTGAAGACTCAAAATGATGATGTTCGCTTGAATTGTATTGCACTTTTGACAATGCTGGCTCGAAGACAGTTGCTCAGTGAAGAATCTGCATATGATATTGGTAACATGTCTATATCTGGTGAAGTTAATTCCATTGAAACTGAAGATGGAGCCAAAGGAACATCTCTGGTTAATTTGTTTGCTGAAGCAATCAAAGGCCCATTACTTTCATCAGACAGTCAAGTCCAAATCGGCACTCTAGATTTGCTCTTTCATTATTTGTCTTCAGTTGGGACTTCAGGAAACCAGATTCAAGTCTTGGTGGAAGAAAATATTGCAGATTATTTATTTGAAATTTTGAGATTATCAGAGAATAAGGATCCGACAGTCAAGATATGCCTTCAGGTACTAAATCTTTTATCAAATTCAGAGGAAGCTTTTAGACCGAGGCTGGTTGTTGGGTTTTCAACTCTAGTTCCAGTACTGCGTTACGTGACAGAAGTTCCTTTTCATCCAGTTCAATACGAGACACTGAAGCTCATTTATGAATGCATTTGTGAGTACCCTGGAGCTGTATCAACTTCTCAGCTGGAGGAACTTGTCCATGTTTTGATAAGAATGCTTATAAAGCATTCTGATGGCGAGATGGGTATGATTCCTGAGACGTTTATAATGGTTTGCTCAGTATTTGTGGCTCTTATGAGATCTCCATCTTTTAATGGAGCTTTAGATATGTCAAAATCAATTGAGGAAGCAGTCAAACATGCCATTTTAGCTTGTCTGTATGTCTCTGAGAAGAATGTCAACCAAATTCTGCAATGCTTGTACCTACTTAAAGAGGCATATGCGTACAGTCATGATGGAAACTCCTTCCACACTAGCAAACTTGAACTTAGAAGCGGCATTCTAGATATATGCAAAACACATTTACTGCCTTGGCTTGCAACCGGCATCAATGAAATGGAAGAAGAAATTATCCTGGGTTTACTGGAAATCTTTCATTCGATACTGCTTCTGCATTGTACTATTAATTATAGGGAATTTGCAGAGACCTTGATGTCATTCTGCTGGTTCAGTTTTTCATATGGATGTCTGGGATTATTTGCAGGAGATAGGATGAAACATAGAATATATTTGTTACTCGGTTCTCTCGTAGATACTCTATTGGGAAATGATACTGGACAACCTATTAGAGATGCTGCTTTACACCTGCCTTCTGATCCTGTCGATTTACTCTTTATGCTGGGGCAAAGGAGTGCAGACAGTTTAGACTTTTCTTCTTGTCAATCAGCTGCTTTGCTAATTATGTACACCAGTTCACTATATGATGAAAGACTTGCAGATGATAAGCTGGTTTTAGCTTCTCTTGAACAATATGTTCTTCTTAATAGCAGTGATTTTCATAATTGGACAACTGATAATTTGGCGGTGACTCGACTGGTGAATCTCTACTGTTTGTTGAGGGGGCTTGGCAACATGAACTACCAAATTCACTATAGTCGAGAAGCTGAGGAGATTATATTCAAGCTCATAAACAATGGTGAATGGGATTTACTTTCTGCAAGAATTCACACAGTTTCAGTGAATTGGTTGTTTCAACAAGAGAATATAATTAAATCATTGTGTCATCAGATTTTGAAATTCTGCAGAAACTATAACTTAGAAGGGGATGCCATGATTATTGGAAACAGTAACCATACTGTGAATGTACAGACACTTGCAGAGTTAGTATCCTCTGAAGATAACTATGGAGCTAAAATTTTTGTATGCTTATTGGCAGAGCTTGCTGAGGAAGAAGACCAGGAGCATGATATAATATCTGTTCTGAATCTAATGGCAACTATGATTCATATACGTCCAGCTGCTTCTGACCAGCTATCTTTTCATGGAATAGGAACATCAATCAGGACTTGTTGCTTCTCAACAACAACTTTCATGTCCATCTTGATTTTGGTTTTTAACAACTTCAGTGCAGTGCATCCTAAAACACTATCAACTGATCAGAGTTGGGTTGCAGTAACCATGAAGATGATGGAGTACTCTATTCCACCAAAAGAGGCAGATATCCTAAGTCAAGAAAGTCTCTTCGTGATTGGCATTCTTTCCTTGGTTTTACATCTTTCCACCAATAAAGTACTTGAAGAGACTTCAAAGCCCATTCTTTTTAATATGAGTATAATCTCTGTTGTCAATACTATAGTCTGTGCAGCTTCTTCAAAAGGACCTGCTTTGATTGACCATGACGAGGGAACAAGTACCGGAGAAACTTTAATATTTGTTCTTTTGCTTCATTACTTCGCTATTAAAAGCTTGCACGCTATCCTTCCAGGGTTTGTGGATTGGCAAAACTTCATTGTTTCGTTGAATTCATCAGAACCACTAGCCTTCATAGGCATCCGTTGTCATGACTTGTGCAGACTTCTGCATTTTGGTTCTCCTGTGGTCAAGATTGTTGCTTCTTATAGCTTGTTAGAATTGTTCAACAGAATATCAGATCAAATTATCAGTAAACATGAAGAATTGAATTGTACTGTTGGATACTTAATGTCCATAAGGAGTATATTGGAAGGGCTGATATTTTATAATGACCAGAGAGTGGCTACAAATTGTGCACTCTGCCTGTCAATTCTTCTGCGGTGGGAAAATCTGACCAAGGAAACGGAACAGTTAGGAAAAAGTAGTTGGTGTAGATTGATTATGGAGGAGATGACAGTATCTTTGGCAGCTCCTGCTTTAGCATCACAATCATTCATGAACAGTCAAACGCCTGCAGTCCTTGTTGCTATTGCGTTGCTGAAACTGCATAAAATCCCCCAGTGGATGAGATCTGTGTTTAATAATTCATGCATATCTGGCATACTGGAGAACCTTGCTGCTACCAATTTGAGCCCAGAAATTTTGGTTTTATTTCGACAACTACTGAAATCTGACTTCTTAAGTACTGAACAAATTGCAATTATAAATCAAATGCTGCAGGAATGCAGAAAACATATGTACGCTAACAATGCTCAAGAAAATCTCCCAAGTGAACCAATAAAGAAGGTCCTCTCCATGCCATATGATCTTGGAAATGTTTGTCAGTATCTCATTGATTTGATGTCAGCAGAGACATATTTAGATAAGGATTCCAGGGGATTCAACATGGGCAGCAAAAGGCTCTTGGAAGAAATAGAATTGTTTTTCAGTGCCTTGACTGTAGATGATGATAGCTGTAGATAA 3891 0.3935 MYMNIDSQNIDFEDDGDSRWCCSQGHRSSLNIQTNHGGTICLVCFSSLISNPLSPTIHVSYALSQLSRSLSIPEFLHSIVTFHPHFLVSPLVTALSSFDDEPIAEQLVHLIINLSASSDASVCREFVARVSDRISSGALGWSLRQLHTLHCLGILLNCEKEDDLHVHIKDIYGLSSILVTGLQLPSEEIRGEVLFVLYKLYVLQSTSNEGDGSDMLIPFCPKLLYLLGDVLLKTQNDDVRLNCIALLTMLARRQLLSEESAYDIGNMSISGEVNSIETEDGAKGTSLVNLFAEAIKGPLLSSDSQVQIGTLDLLFHYLSSVGTSGNQIQVLVEENIADYLFEILRLSENKDPTVKICLQVLNLLSNSEEAFRPRLVVGFSTLVPVLRYVTEVPFHPVQYETLKLIYECICEYPGAVSTSQLEELVHVLIRMLIKHSDGEMGMIPETFIMVCSVFVALMRSPSFNGALDMSKSIEEAVKHAILACLYVSEKNVNQILQCLYLLKEAYAYSHDGNSFHTSKLELRSGILDICKTHLLPWLATGINEMEEEIILGLLEIFHSILLLHCTINYREFAETLMSFCWFSFSYGCLGLFAGDRMKHRIYLLLGSLVDTLLGNDTGQPIRDAALHLPSDPVDLLFMLGQRSADSLDFSSCQSAALLIMYTSSLYDERLADDKLVLASLEQYVLLNSSDFHNWTTDNLAVTRLVNLYCLLRGLGNMNYQIHYSREAEEIIFKLINNGEWDLLSARIHTVSVNWLFQQENIIKSLCHQILKFCRNYNLEGDAMIIGNSNHTVNVQTLAELVSSEDNYGAKIFVCLLAELAEEEDQEHDIISVLNLMATMIHIRPAASDQLSFHGIGTSIRTCCFSTTTFMSILILVFNNFSAVHPKTLSTDQSWVAVTMKMMEYSIPPKEADILSQESLFVIGILSLVLHLSTNKVLEETSKPILFNMSIISVVNTIVCAASSKGPALIDHDEGTSTGETLIFVLLLHYFAIKSLHAILPGFVDWQNFIVSLNSSEPLAFIGIRCHDLCRLLHFGSPVVKIVASYSLLELFNRISDQIISKHEELNCTVGYLMSIRSILEGLIFYNDQRVATNCALCLSILLRWENLTKETEQLGKSSWCRLIMEEMTVSLAAPALASQSFMNSQTPAVLVAIALLKLHKIPQWMRSVFNNSCISGILENLAATNLSPEILVLFRQLLKSDFLSTEQIAIINQMLQECRKHMYANNAQENLPSEPIKKVLSMPYDLGNVCQYLIDLMSAETYLDKDSRGFNMGSKRLLEEIELFFSALTVDDDSCR 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g03027 1296 SUPERFAMILY ARM repeat 104 830 IPR016024 -
Trre5g03027 1296 Gene3D - 42 373 IPR011989 -
Trre5g03027 1296 PANTHER PROTEIN PRD1 13 1292 IPR044968 GO:0042138
Trre5g03027 1296 SUPERFAMILY ARM repeat 62 366 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g03027 Trre-Chr5 24658496 24665228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g03027 K25318 - gmx:100784718 1995.32