Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02998 ATGGGTACAGTTGTTGAAGAGAACAACTCACATGGATGCTGCAAATCAGGACCAGGTTATGCTACCCCTCTTGAAGCCATGTCTGGTCCCAGAGAAACTCTTATTTATGTCACTGCTGTCTACTCAGGGACAGGAATTGAGAAGCCAGATTATTTGGCAACAGTGGATGTGGATCCAAACTCTCCAACTTATTCAAAAGTGATTCATAGATTACCTGCTCCTTACTTAGGTGATGAATTGCATCATACTGGCTGGAATTCTTGTAGCTCTTGCCATGGTGACCCATCTGCTCAGAGAAGATTTCTCATCGTACCTGGTCTTGTATCAGGCCGCGTATATATTGTTGACACCAAAACAAATCCAAAGGCTCCATCTTTGCACAAAGTTGTAGAGCCTGCTGATATCTTGCAGAAGACTGGATTAGCTTATCCTCACACATCTCATTGCCTTGCTTCTGGTGAAATTATGATCTCATGTATCGGAGATGGTGAAGGAAATGCTGAAGGAAATGGATTTCTTCTTCTTGATTCAGATTTTAATGTCAAAGGAAGGTGGGAGAAACCAGGGCACAGTCCATTGTACGGGTATGACTTTTGGTACCAACCACGGCACAATACTATGATTAGCACATCATGGGGTGCTCCTAAGGCTTTTACACAAGGTTTTAACTTACAGCATGTCGCTGATGGACTCTATGGGAGGCATCTCCATGTATACGACTGGCCCGGGGGTGAAATAAAACAAACACTTGACCTTGGTGATACAGGGCTTTTACCCTTGGAGATAAGGTTCCTGCATGATCCTGCTAAAGACACGGGTTTTGTTGGGAGTGCATTGACAAGTAACCTGATACGGTTTTTCAAGACACAAGATGGATCATGGAGCCATGAGATTGTGATATCAGTGGAACCATTGAAAGTGCAAAACTGGATTCTTCCCGAGATGCCTGGGCTTATAACTGATTTTCTGATTTCTCTTGATGATCGGTTTCTGTACTTTGTAAACTGGCTTCACGGCGATATAAGGCAGTATAACATCGAGGATGTTAAAAATCCTAAACTCACTGGTCAAATATGGGTTGGTGGCCTTGTCCAGAAAGGAAGCCCTGTAGTAGCTGTTAAAGATGGCGAAACTTGGCAATCTGATGTGCCAGAGATTCAGGGGAATAAGTTGAGAGGTGGTCCTCAGATGATTCAATTGAGCTTAGACGGGAAGAGGCTGTATGTTACGAACTCACTGTTTAGTACTTGGGATAAACAGTTTTATCCAAAGCTTGTAGAGCAAGGTTCTCACATTTTACAGATTGATGTTGATACTGAGAATGGTGGTCTGAAAATTAATCCAAACTTCTTTGTGGACTTTGGAGCTGAACCTGATGGTCCTTCCCTTGCTCATGAGATGAGATATCCTGGTGGCGACTGCACTTCAGATATATGGATTTAA 1443 0.431 MGTVVEENNSHGCCKSGPGYATPLEAMSGPRETLIYVTAVYSGTGIEKPDYLATVDVDPNSPTYSKVIHRLPAPYLGDELHHTGWNSCSSCHGDPSAQRRFLIVPGLVSGRVYIVDTKTNPKAPSLHKVVEPADILQKTGLAYPHTSHCLASGEIMISCIGDGEGNAEGNGFLLLDSDFNVKGRWEKPGHSPLYGYDFWYQPRHNTMISTSWGAPKAFTQGFNLQHVADGLYGRHLHVYDWPGGEIKQTLDLGDTGLLPLEIRFLHDPAKDTGFVGSALTSNLIRFFKTQDGSWSHEIVISVEPLKVQNWILPEMPGLITDFLISLDDRFLYFVNWLHGDIRQYNIEDVKNPKLTGQIWVGGLVQKGSPVVAVKDGETWQSDVPEIQGNKLRGGPQMIQLSLDGKRLYVTNSLFSTWDKQFYPKLVEQGSHILQIDVDTENGGLKINPNFFVDFGAEPDGPSLAHEMRYPGGDCTSDIWI 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02998 480 PANTHER METHANETHIOL OXIDASE 12 480 IPR008826 GO:0008430
Trre5g02998 480 Pfam 56kDa selenium binding protein (SBP56) 14 480 IPR008826 GO:0008430
Trre5g02998 480 SUPERFAMILY 3-carboxy-cis,cis-mucoante lactonizing enzyme 49 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02998 Trre-Chr5 24340719 24343735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02998 K17285 - gmx:100794235 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02998 5 24340719 24343735 Trre5g02998 5 24340719 24343735 ECH