Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02990 ATGTCCCAACCCAGATTCACTTCTACAATCTTCCTTTTTCTCACACTTCTCCTCATTCACACACATCTTCCAATCTCCACTTCTCTCAATCTGTTGCATAACACTGAAATCACTAAGAGGGTTTGTACAAAAACCATTGGAGATTGTTTAGAAGAATCTGAGCTAATGGATTCAGAAAGCAATAGAAGAGTTTTAGCAATGCAAAAAAAGTACATAAGCTATGATACATTGAAGAGAGATATGGTTCCTTGTGATAAAGCTGGTGCTTCTTACTATAACTGTCATCCAAAACAAGCTAATCATTATAGTAGAGGTTGTGAGGTTATTACTGCATGTGCTAGAGGTTCTTGA 351 0.3675 MSQPRFTSTIFLFLTLLLIHTHLPISTSLNLLHNTEITKRVCTKTIGDCLEESELMDSESNRRVLAMQKKYISYDTLKRDMVPCDKAGASYYNCHPKQANHYSRGCEVITACARGS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02990 116 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 9 114 - -
Trre5g02990 116 Pfam Rapid ALkalinization Factor (RALF) 54 114 IPR008801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02990 Trre-Chr5 24229778 24230128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02990 - - gmx:100793523 143.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02990 5 24229778 24230128 Trre5g02990 5 24229778 24230128 ECH