Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02985 ATGGATCGTTCAGGGGAGGAGGAGATCGGTTTCCGGCGACTCGCCTCGTTCGTGTGCGAATTCGAACCTTTATCTCAGGAAGATCTTCAAGCCATTGACGCCACTCTTCAATCTTCTCTCCCCAAATCCACCACCACCACAGTCACCGCCACCACCACCGACAACAACAAACGTCCCTTCACCTCTCACTCTCCCATTCGCCACTGCCGCCGCCGCTTGCCTACATCGCTCATCGCTCTTCAACTCCCACGTTCTCTCTCTTTCTCACCTTCTCCAGGCCATTCAAAGATGCGGTTACCTGTAATGAAGTTTTGCGGGCAAATTTTGTATAGTAGAACTTTTAATGATGTTGAGAAAGCTGTAACAAAGTTCGTAAAAAATATTGAAGAAAAGAAAAGAGAGATGATGCAAATTGCAATCGGATTCGACATTGAGTGGAAACCCACTTTCAGAAGAGGTGTTCCACCTGGGAAAGCAGCAGTGATGCAGATATGTTGCGACACTAATCATTGTCTTGTTCTTCATCTAATTCATTCTGGAATCCCTCGAAATCTACAGCTTTTACTTGAAGATCCCACAGTTTTGAAGGTTGGAGCTGGGATTGGCGGTGATGCTACTAAGGTTTCTAGAGATTATGACATATCCATTAAAGGTGTGGAAGATCTTTCTTCTCATGCTAATCAAAAGCTAGGTGGAGGTCTGCACAAGTGGGGTCTTGCATCTTTGACCGAAAAACTTTTATCAAAACAGCTTAAGAAACCTAGCAAAATAAGAATGGGGAATTGGGAGACTCCTTTTTTGTCAAAGGAACAACTAGAGTATGCTGCCACAGATGCTTTTGCTTCTTGGTTTCTCTATCAGACTATTAAAGATCTCCCAGATGTGCAGGATGTTACCGATAAAGGTAGTGAAGTTGATGGTGTGCCGCAACAATGA 936 0.4434 MDRSGEEEIGFRRLASFVCEFEPLSQEDLQAIDATLQSSLPKSTTTTVTATTTDNNKRPFTSHSPIRHCRRRLPTSLIALQLPRSLSFSPSPGHSKMRLPVMKFCGQILYSRTFNDVEKAVTKFVKNIEEKKREMMQIAIGFDIEWKPTFRRGVPPGKAAVMQICCDTNHCLVLHLIHSGIPRNLQLLLEDPTVLKVGAGIGGDATKVSRDYDISIKGVEDLSSHANQKLGGGLHKWGLASLTEKLLSKQLKKPSKIRMGNWETPFLSKEQLEYAATDAFASWFLYQTIKDLPDVQDVTDKGSEVDGVPQQ 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02985 311 SUPERFAMILY Ribonuclease H-like 140 289 IPR012337 -
Trre5g02985 311 FunFam Werner Syndrome-like exonuclease 92 296 - -
Trre5g02985 311 MobiDBLite consensus disorder prediction 45 64 - -
Trre5g02985 311 Pfam 3'-5' exonuclease 120 290 IPR002562 GO:0003676|GO:0006139|GO:0008408
Trre5g02985 311 SMART 35exoneu6 122 294 IPR002562 GO:0003676|GO:0006139|GO:0008408
Trre5g02985 311 Gene3D - 93 297 IPR036397 GO:0003676
Trre5g02985 311 PANTHER 3-5 EXONUCLEASE 49 288 - -
Trre5g02985 311 CDD WRN_exo 130 290 - -
Trre5g02985 311 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02985 Trre-Chr5 24140668 24145145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02985 K22807 - tpra:123905592 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02985 5 24140668 24145145 Trre5g02985 5 24140668 24145145 ECH