Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02973 ATGGTTATGTCTTCTGACAATGTTATTGGACTTGTGTTGGCTCTATCTTCAAGCATTTTCATTGGTTCAAGTTTTATAATTAAAAAAATGGGTCTTAAAAAAGCTGCCACTAATGGGAATAGAGCAGCAACAGGAGGGCATTCCTATTTGTATGAACCACGTTGGTGGGCTGGAATGACTTCAATGATTATTGGGGAAATAGCTAATTTTGCAGCTTATGCATTTGCACCTGCCATCCTTGTAACTCCTTTGGGAGCTTTAAGCATCATTGTTAGTGCAATTCTAGCTCACTTCATCTTAAAAGAGAAATTGCACATCTTTGGCATGCTTGGATGTGCTCTCTGCGTGGTGGGATCTACAACTATTGTTCTTCATGCACCACATGAGAAAGTTATTCATTCTGTCAAGGAAGTATGGCAACTTGCTACAGAACCAGCTTTTATTGTATACTCTTGTTGGGTGGTGGGACTGGTTCTAGTTCTTATTTTCCGTTTCGCACAAAGTCATGGACAGAGCCATATGATTATTTATATTGGAATATGCTCTCTCACAGGCTCAATTACGGTTATGAGTGTCAAAGCGCTAGCGATAGCTTTGAAGCTTACGTTTGAAGGGATGAATCAATTTATTTACTTTCAAACATGGTTCTTTACATTAGTTGTGATAGGATGTTGCCTTTTGCAAATCAACTACTTGAACAAGGCTTTGGACACCTTCAACACTGCTGTGGTATCACCAGTTTACTATGTCATGTTTACCACATTTACCATTATCGCCAGCATAATCATGTTTAAGGAATGGGACACACAAAGTGCATCTCAGATTGCTACAGAGTTGTGTGGTTTCGTGACAATTTTATCTGGGACCTTTCTCCTTCACAAAACTAAAGATATGGGAAATAGACCCGCAGAAATTTCTGATCCTTCAAGTCCACAAGTACAGCTTACTAACATCACTAAGTCGCCAGATAGACCCGAAATATGA 984 0.3933 MVMSSDNVIGLVLALSSSIFIGSSFIIKKMGLKKAATNGNRAATGGHSYLYEPRWWAGMTSMIIGEIANFAAYAFAPAILVTPLGALSIIVSAILAHFILKEKLHIFGMLGCALCVVGSTTIVLHAPHEKVIHSVKEVWQLATEPAFIVYSCWVVGLVLVLIFRFAQSHGQSHMIIYIGICSLTGSITVMSVKALAIALKLTFEGMNQFIYFQTWFFTLVVIGCCLLQINYLNKALDTFNTAVVSPVYYVMFTTFTIIASIIMFKEWDTQSASQIATELCGFVTILSGTFLLHKTKDMGNRPAEISDPSSPQVQLTNITKSPDRPEI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02973 327 PANTHER UNCHARACTERIZED 6 312 IPR008521 GO:0015095|GO:0015693|GO:0016020
Trre5g02973 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 126 - -
Trre5g02973 327 MobiDBLite consensus disorder prediction 301 327 - -
Trre5g02973 327 MobiDBLite consensus disorder prediction 305 321 - -
Trre5g02973 327 Pfam Magnesium transporter NIPA 6 298 IPR008521 GO:0015095|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02973 Trre-Chr5 23933086 23935588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02973 K22733 - gmx:100785617 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02973 5 23933086 23935588 Trre5g02973 5 23933086 23935588 ECH