Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02970 ATGGCAGAAGCAAATAATCTCCGCAGTCGAATTTCACAGATTCACAACTACATCAAAGACGACGACGAAGAAGAATCAAACCCTTCAGATTCACAAGATTTACTCCGCGACTGTGCTATTCATGTTCAAAACACAGTACAACAAATTGTATCCCAATTCTCTGATATCGATTCTTTACCAAATCATGATTTCGATGCTTATGTAGAGTATTTGAAAAAGGAACTTAATGAAGTAGAGGTTGAATCTGCCAATGTAGCTACTGAGATTGAGCATCTTGCGAGAACTCGTAAGGATGATTCTATTAATTTGGAGGCCAAACTTGAAGAATTGGAATGTTCTTTACAATATATTACATCAGAGGAGCGGATGACAGTTGAGGCTAATGAAGGAATTGTTTCCCCAATGTTGGAAGACACTGTCATGAATCTAGACGAAAATTTGGAGCAATTGAAACTTGAGAATAAGGTTGATGAAATGAAGGCGATTCTGAAGACTATGGAGTGTCTTCAGTGTAAGGTCAAATGGTTTGATACTATAGATCAGGTTGACGATGCATTGACGGGTCTAAAAGTTCTTGCATTTGATGAGAATTGCATTAGGCTTTCTTTGCATACTTATATGCCAACGGCAGAGGGCATTGCATGCCTACAGAGAGTTGAAGATACCAATGATGCATCTGTGCTGAATCATGAGTTATTGATTGAAGTGTTTGAGGGCACCATGAAGTTAAAGGATATTCAGGTTTTTCCAAATGATATATATGTGGATGACATTGTTGATACTGCAAAGTCTTTCAGTAAGTCCTCATTGCAGTGGTTAATACAAGAACTACAGCATAGAATTATACTAAGCACACTTCGGAGACTTGTGGTAAATGATGCTAATAAATCAAGATATTCACTTGAATACTTCGACAAAGATGAGACTATTGTAGCTCATTTGGTTCAAGGAATTGATGCATACATAAAATTGTCTCATGGTTGGCCAATATTTGGTTCTCCATTGAAGCTGATATCTATCAAGGGTTTAGATATGTTGAAGAAAAGTTCTGCAAGTTTTCACTGCGAAGTTGAGAATCTGGCCAACTCTTTAAACACTCATACTCGGGAAAATATACTGGGCTTTGTTGATGCTGTTGAAAACGTGCTTAAAAAACAATTGCAGCTTGATCCTAGAGCCACTGATGGTTCTGGCTAA 1197 0.3768 MAEANNLRSRISQIHNYIKDDDEEESNPSDSQDLLRDCAIHVQNTVQQIVSQFSDIDSLPNHDFDAYVEYLKKELNEVEVESANVATEIEHLARTRKDDSINLEAKLEELECSLQYITSEERMTVEANEGIVSPMLEDTVMNLDENLEQLKLENKVDEMKAILKTMECLQCKVKWFDTIDQVDDALTGLKVLAFDENCIRLSLHTYMPTAEGIACLQRVEDTNDASVLNHELLIEVFEGTMKLKDIQVFPNDIYVDDIVDTAKSFSKSSLQWLIQELQHRIILSTLRRLVVNDANKSRYSLEYFDKDETIVAHLVQGIDAYIKLSHGWPIFGSPLKLISIKGLDMLKKSSASFHCEVENLANSLNTHTRENILGFVDAVENVLKKQLQLDPRATDGSG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02970 398 PANTHER RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE)-RELATED FAMILY PROTEIN 2 393 - -
Trre5g02970 398 Coils Coil 133 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02970 Trre-Chr5 23911038 23915327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02970 - - tpra:123908474 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02970 5 23911038 23915327 Trre5g02970 5 23911038 23915327 ECH