Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02958 ATGGGTTTGGTTTTATTGTCTCCTCTTATTGTTACATTGTTTCTGTTGTTATCAATACTAAGTTCAATCATTGTTGATGGTGGTGATGTTCCAATTCCATCCACTCTTGATGGACCTTTCAAGCCTGTGACGGTTCCTCTTGACAAAAGCTTCCGTGGAAATGCTGTTGATTTGCCTGATACAGATCCTCTTGTTCAAAGATATGTTGAAGGTTTTCAACCTGAACAAATCTCTCTCTCCCTCTCTGCTTCTCATAGTTCTGTTTGGATTTCTTGGATTACAGGAGAGTTCCAAATTGGGGACAATATAGAACCACTAGATCCTGAAACAGTTGCTAGCATAGTTCAATATGGAAGGTTCGGAAGGTCAATCAATCGGCAAGCTGTAGGTTATTCCCTTGTGTATAGTCAGCTATATCCTTTTGAAGGACTTCAGAACTACACTTCTGGAATTATACATCATGTTCGTCTCACAGGATTAAGAGCCAACACACTATATCAATATCAATGCGGAGATCCATCGTTATCAGCAATGAGTGATGTTCATTATTTCCGGACAATGCCAGTTTCAGGCCCAAAGAGCTACCCTAGTAGAATTGCAGTGGTTGGAGACTTAGGTCTTACATACAATACCACATCCACTGTCAATCATATGACAAGCAATCATCCTGATCTTATTCTATTGGTTGGCGATGCTAGTTATGCTAACATGTATCTTACTAATGGTACTGGTTCAGATTGCTACTCTTGCTCATTTTCTAATACCCCCATCCACGAAACATATCAACCGCGCTGGGATTATTGGGGAAGGTACATGCAACCTTTGATTTCTAGTGTCCCTATAATGGTAATAGAAGGGAATCATGAGATAGAACCACAAGCCGAGAACAAAACATTTGTTGCTTATAGTTCTCGATTTGCATTTCCGTCAGAAGAGAGTGGATCATCATCCACTTTTTATTATTCTTTCAATGCTGGAGGAATACATTTTATAATGCTCGGTGCCTATATATCGTACGACAAGTCAGGGGACCAGTACAAATGGTTGGAGAAGGATTTGGCTTCTCTTGACAGGGAAGTAACTCCATGGTTGGTAGCTACATGGCATGCACCTTGGTACAGCACTTACAAGGCACATTATAGAGAAGCAGAATGTATGAGGGTGGAGATGGAAGACTTACTATATAAATACGGCGTCGACATTGTCTTCAATGGACATGTTCATGCATATGAGCGATCAAACCGAGTATATAACTACACGTTGGATCCTTGCGGTCCTGTTTACATCACGGTTGGTGACGGTGGTAACCGAGAAAAGATGGCAATTACTCATGCTGATGAACCAGGAAACTGTCCAGAACCATCAACTACACCAGATAACTTTATGGGCGGCTTCTGCGCTTTCAATTTTACGTCCGGTCCAGCAGCAGGCAAGTTTTGTTGGGACCAACAGCCTGATTATAGCGCTCTCCGCGAAAGTAGCTTCGGTCATGGAATTCTAGAGGTGAAGAATGAAACTCATGCATTATGGATTTGGCACCGAAATCAAGACTATTATGGTAACACTGGTGATGAGATTTACATTGTTAGGCAGCCAGATAAGTGTCCATCAATCAGTCAAGCCAGAGGGGGTACATAA 1638 0.4176 MGLVLLSPLIVTLFLLLSILSSIIVDGGDVPIPSTLDGPFKPVTVPLDKSFRGNAVDLPDTDPLVQRYVEGFQPEQISLSLSASHSSVWISWITGEFQIGDNIEPLDPETVASIVQYGRFGRSINRQAVGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRANTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDASYANMYLTNGTGSDCYSCSFSNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEPQAENKTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPSTTPDNFMGGFCAFNFTSGPAAGKFCWDQQPDYSALRESSFGHGILEVKNETHALWIWHRNQDYYGNTGDEIYIVRQPDKCPSISQARGGT 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02958 545 Gene3D - 467 533 IPR029052 -
Trre5g02958 545 Gene3D - 192 457 IPR029052 -
Trre5g02958 545 Pfam Purple acid Phosphatase, N-terminal domain 74 186 IPR015914 GO:0003993|GO:0046872
Trre5g02958 545 SUPERFAMILY Purple acid phosphatase, N-terminal domain 52 188 IPR008963 GO:0003993|GO:0046872
Trre5g02958 545 FunFam Purple acid phosphatase 193 455 - -
Trre5g02958 545 Pfam Iron/zinc purple acid phosphatase-like protein C 425 517 IPR025733 -
Trre5g02958 545 Pfam Calcineurin-like phosphoesterase 198 410 IPR004843 GO:0016787
Trre5g02958 545 PANTHER ACID PHOSPHATASE RELATED 15 535 IPR039331 GO:0003993
Trre5g02958 545 CDD MPP_PAPs 193 530 IPR041792 -
Trre5g02958 545 Gene3D - 73 189 - -
Trre5g02958 545 SUPERFAMILY Metallo-dependent phosphatases 198 519 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02958 Trre-Chr5 23812676 23816049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02958 73 436 Miscellaneous Gene Families AT2G03450 25.714 1.26e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02958 K22390 - gmx:100784006 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02958 5 23812676 23816049 Trre5g02958 5 23812676 23816049 ECH