LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre5g02859	ATGCGACAGACAGAAGTGCCTCCGTCAAAATACGGTACTAACGGTAGAGCTGTTAAAATGGTACCGGCAACTGAGCTAGTGAAAAGAAAGACAGCGTCAGAAAATAAAGCGGAGACGGTGAATGGCTCAAAGCAAGTTGTTAATGGAGCAAGTTTGGTAAGAAGAGATCCTACTCCAACATTGACAAAGACAACAAAGCCGGAAACCTCCAAAGAACTTCCTCCGTTGGAGGAGCTAAAGGTTTTGCCGTCGGACGAAGGCTTCAGTTGGGCCAATGAAAATTACAATTCCTGGCAGAGATCTATTGATGTCTGGTCCTTTGTTCTTTCTTTACGTGTCCGTGTTCTTTTGGACAATGCAAAATGGGCTTATGTGGGTGGCTTTACAGAAGAAAAGCAGAAAAGCAGAAGGCGAAAAACTGCTTCATGGCTAAGGGAATGTGTATTACAGCTCGGTCCAACTTTCATTAAACTTGGACAGTTATCATCAACAAGGTCGGATCTATTTCCCTCGGAATTTGTGGATGAACTCGCAAAACTGCAGGATAAGGTCCCTGCTTTCTCACCAACGAAAGCACGAGGCTTTATTGAGAGTGAATTAGGTGCTCCCATTAACGTATTGTTTAAAGAGTTTGAAGACCGGCCAATTGCCGCTGCAAGTCTTGGTCAAGTTCATCGTGCAATTCTGCACAATGGTGAAAAAGTAGTTATCAAAGTTCAAAGACCTGGCTTAAAGAAGCTTTTTGACATTGATTTGCAAAATTTAAAGCTGATTGCGGAGTATTTTCAGAGAAGTGAAACTCTAGGTGGTCCAACTAGAGATTGGATCGGTATATACGAAGAATGTGCAACGATTTTGTATCAAGAAATTGATTACATAAATGAAGGGAAGAATGCAGATAGGTTCCGTCGAGATTTTCGAAACATAAAGTGGGTCCGAGTACCTCTGGTTTATTGGGATTATACAGCGATGAAGGTGTTGACCTTGGAGTATGTACCAGGTATTAAAATAAATCAAGTGGATACATTGACTTCACGTGGTTATGATCGATTGAGGATCTCGTCACGTGCTATTGAGGCATACTTGATTCAGATATTGAAAACAGGTTTTTTTCACGCCGATCCACATCCTGGAAATCTTGCTATTGATGTCGATGAATCAATTATTTATTATGACTTTGGCATGATGGGAGAAATAAAATCCTTCACCCGAGAGAGATTGCTTGAACTGTTTTATTCTGTTTATGAGAAGGATGCCAAAAAGGTTATGCAATGCCTTATTGATCTTGGAGCACTACAACCCACCGGGGACCTGTCAGCTGTGAGGAGATCTGTACAGTATTTCTTGGACAATCTTCTAAGCCAGACACCAGATCAACAGCAGACATTGTCTGCAATTGGGGAGGATTTGTTTGCAATAGCACAAGACCAGCCATTCCGGTTTCCATCTACCTTCACCTTTGTTATTAGAGCATTTTCTACACTTGAAGGCATAGGTTACATACTAAATCCAGATTTTTCCTTTGTGAAGATTGCTGCACCCTATGCACAGGAACTTCTAGATATAAGGCAAAGGCAGCCAACCGGGCCACAACTCGTCCAGCAGATAACAAAGCAAGCAAATGATGTAAGAACAAATTCCATATCAATGCCGTTAAGAGTTCAAAGAATAGAGGAGTTTGTAAAGCAAGTTGAAGCAGGGGATTTGAAACTCCGAGTTCGAGTCCTAGAGTCTGAAAGAGCTGCTCGGAAAGCGACAGTGTTACAAATGGCAACTATGTACACAGTATTAGGAGGAACCTTGCTAAATATTGGTGTCAATTTGAGTAGCCAAGGCAATCAAACTTTTGCAAATGGATCATTCGTTGGTGCAGGTATTTTGTTCACACTATTCTTGAGGTCTATGCAAAGGGTAAATAAGCTCGACAAGTTTGAGAAAATGTTGTAG	1947	0.4145	MRQTEVPPSKYGTNGRAVKMVPATELVKRKTASENKAETVNGSKQVVNGASLVRRDPTPTLTKTTKPETSKELPPLEELKVLPSDEGFSWANENYNSWQRSIDVWSFVLSLRVRVLLDNAKWAYVGGFTEEKQKSRRRKTASWLRECVLQLGPTFIKLGQLSSTRSDLFPSEFVDELAKLQDKVPAFSPTKARGFIESELGAPINVLFKEFEDRPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLQNLKLIAEYFQRSETLGGPTRDWIGIYEECATILYQEIDYINEGKNADRFRRDFRNIKWVRVPLVYWDYTAMKVLTLEYVPGIKINQVDTLTSRGYDRLRISSRAIEAYLIQILKTGFFHADPHPGNLAIDVDESIIYYDFGMMGEIKSFTRERLLELFYSVYEKDAKKVMQCLIDLGALQPTGDLSAVRRSVQYFLDNLLSQTPDQQQTLSAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGYILNPDFSFVKIAAPYAQELLDIRQRQPTGPQLVQQITKQANDVRTNSISMPLRVQRIEEFVKQVEAGDLKLRVRVLESERAARKATVLQMATMYTVLGGTLLNIGVNLSSQGNQTFANGSFVGAGILFTLFLRSMQRVNKLDKFEKML	648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre5g02859	648	MobiDBLite	consensus disorder prediction	30	72	-	-
	Trre5g02859	648	SUPERFAMILY	Protein kinase-like (PK-like)	181	422	IPR011009	-
	Trre5g02859	648	CDD	ABC1_ADCK3-like	179	426	-	-
	Trre5g02859	648	PANTHER	CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED	46	592	-	-
	Trre5g02859	648	MobiDBLite	consensus disorder prediction	55	69	-	-
	Trre5g02859	648	Pfam	ABC1 atypical kinase-like domain	179	425	IPR004147	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre5g02859	Trre-Chr5	22786361	22790628	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre5g02859	-		K13457	gmx:100794474	1139.79

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Trre5g02859	5	22786361	22790628	Trre5g02859	5	22786361	22790628	ECH