Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02835 ATGTCTGTTCATCTTTCATTCAGATCACAATCAGTAGCAAACACAATCCAAGCTACACCAATATTACCACAAAGAATATCAGAAGAACCATTACCAGCAAAAACAGCACAAAGCACAGTCACATGCATCTACCAAGCCAGCATTGGAAACCAATGGAGAAACATATCAGTCTTATGGTGCAAAAGTCTCATTAATCATACATTAAACCTCAAAATCGACAGCGTAAGAGGCGAACAGTTTCATCACAATATCAAAATTGAAGTTAAACAATGGTTTAATTGGAACAAAAAGGGTTGCAAGTCGTTCGAAGTTGACGGTAATCAAATAGATGTCTATTGGGATCTACGATCGGCTAAATTCGCCGGTGGTTGTCCTGAGCCGTGCAGCGATTATTATGTGACGATAGTTTGCGACGAAGAGGTTGTTTTGTTGTTGGGTGATTACAAGAAAAAGGCTTATAAGAGAATGAAAATGAGACCAACAATTGTTGAAGCTACATTATTGGTTAAAAGAGAGAATGTATTTGCAAAGAAAAGTTTTTCAATAAAGGCTAAATTTGATGAGAAGAGAAAAGAGAGTGATATTGTTGTTGAAAGTTCAACTGTTGGTAATAAAGATCCTGAAATGTGGATTAGTATTGATGGGATTGTTTTGATTCATGTTAAGAATTTGCAGTGGAAATTTAGAGGAAATCAAACTGTCATGGTTAATAAACAACCTGTGCAAGTGTTTTATGATGTTCATGATTGGTTGTTTAGTGTTTCAGGATCTGGGCCTGGGCCTGGGGTTTTTATCTTCAAACCTGGGCCTACTGAAGTTGAGAATGATGACAAAGGTGTTGAAGGTTGTGAGAGTGATGATGGTAGTAGTGCTACTAGTGGTTATTACTCAACTAAGGGTTATACTCCTTTTGAGTCTTGTCTTGTACTTTGTGCCTATAAACTTGAGTAA 951 0.3701 MSVHLSFRSQSVANTIQATPILPQRISEEPLPAKTAQSTVTCIYQASIGNQWRNISVLWCKSLINHTLNLKIDSVRGEQFHHNIKIEVKQWFNWNKKGCKSFEVDGNQIDVYWDLRSAKFAGGCPEPCSDYYVTIVCDEEVVLLLGDYKKKAYKRMKMRPTIVEATLLVKRENVFAKKSFSIKAKFDEKRKESDIVVESSTVGNKDPEMWISIDGIVLIHVKNLQWKFRGNQTVMVNKQPVQVFYDVHDWLFSVSGSGPGPGVFIFKPGPTEVENDDKGVEGCESDDGSSATSGYYSTKGYTPFESCLVLCAYKLE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02835 316 PANTHER EXPRESSED PROTEIN 33 314 IPR008586 -
Trre5g02835 316 Pfam Plant protein of unknown function (DUF868) 36 314 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02835 Trre-Chr5 22590502 22591452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02835 33 267 EF-hand Containing Proteins AT5G28150 41.277 1.15e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02835 - - ccaj:109811702 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02835 5 22590502 22591452 Trre5g02835 5 22590502 22591452 ECH