Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02825 ATGCAAGTCTTCCCCAGCTCTTATCTTTTCACTTTCCCTAAACCCATAAACCCTCCCTCTCCCCTTTTCCACCGTCCTCCTCCGTCTATACTCCATCAAAAACCGCCACTCACCACCGTCGCCAAGTCCTTCACTTCCGACGAGTTCCCCGTCGACGACACCTTCATCCAGACATTCGGCCCCAAAGGCAAGGAAACAGAGGATGAAGCTCGAAGACGCAACTGGATAGAACGTGGCTGGGCTCCCTGGGATGAAATCCTCACTCCAGAAGCCGAATTCGCTCGTACGAGTCTCAATGAAGGTGAAGAAGTTCCTCTCAGTTCACCGGAATCCATTGAAGCGTTCAAAATGTTGGACCCTAGGTACCGTAAGAAGAAGATTAAGGAAATGGGATTGACGGAGGAGGAGTACCTGGCGAAGCAGTTTGAGATTAAGGGAGAGATTCCGGAGCCGTTGGTGACTAAATGGGCCGGACCTTTGGTGGTAAGGTTAGTGCCGCCGCGCGATTGGCCGCCGAGAGGGTGGGAGGTGGATCGGGAAGAACTTGCGTTTATTCGAGAAGCGCATAAGGTGCAGGCGAAGAGAGTGAGATTGGAGGATATAGAAAATGGAGTTAGAACTGAAACTGATGATGTGTGTTTGGATAGGTATAAGGTGTTTTTGAAACAGTACAAGGAGTGGGTGGAAGCTAACAAGGATATATTAGAAGAGGAATCTTATAAGATTGACCAAGATTATTACCCTGGTAGGAGGAAAAGAGGCAAGGACTACAAGGAGGGCATGTACGAGCTACCATTCTATTATCCTGGCCAGATTTGTGTGGGGAAGGTTACAACTTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGGGTATACGACGGGTGGGTTCCTATAAAGAACAATGATTGGTTTTGGATTCGCCATCATATAAATGTGGGCATGACTGTCATTGTTGAAATTACGGCAAAACGAGATCCTTATCACTTCCGGTTCCCAATCGAACTTCGTTTTGTTGATCCAAATATAGATCATCTGATCTTTAACAGATTCGAGTTCCCACCAATATTTCACCGTGAGGAAGATACTAATCCTGATGAATTGCGGCGTGACTGTGGAAGACCTCCTGTTCCTAGAAAAGATCCAAGAGACAAGCCAGAGGAAGAACCTCTAGTTTCCAATCACCCATATGTTGAAAAGTTGTGGCAGATTAATGTAGCTGAGCAAATGATTTTGAATGATATGGATATTAATCCTGATAAATATAAAGGCAAAAAGTTGTCAGACTTGGTTGATGAAGATGATATTAATGAAGAAAACCCAGTTCAATATACAAAAGTTCAGTATAAGAATGCATTAGTGCCAAAAGTAACTATGAAAACTAGTGTCAAAGAGCTTGACTTAGAGGCTGCAATTGCTGAGCGTGAGCACCATAGGAAACTATGGAAGGAAGCAAAGGACAGAGGTGAGGAATACAAAATCACCACATTGAAGCGCAATATTGAGATGGATGAATATGATTTCATGCATTGGCGGAGATCATTTGAAGAAAGAGAAGCATTGATTAGAGACATCAGCTGTCGCAAAACTCTTGGTTTGCCATTGGAGGAGCCGGGAAGGTATGTAGATGCTAGTTTTTTCGGTAAAGACAAGTATGATCCTGAAAGTCCTCTGTATCGATATGATTATTGGGGAGAACCCAAGCATTCAGAAAAGAGCAGGAAAGAGCGGATGACAGATACTCATAACAAATCAATTGTGGCCAAGGGTACTGTTTGGTGTGAAACGCCATACGAAGATAGCATCAAACTGGTTGACGAGTATACAAAGCAAGGTGAAGGTGCTGAAGAAGAGGAAGATGACGAGGATGATGATGATGAATTTGACTACATTCTGAGCAAACTTGCGAATAATGTCTCAGATCAAATTCATGTTAACGGGACCGAGACTTCTAGACTGTCAGAAGGTCTGTTTGATGATTGA 1986 0.4401 MQVFPSSYLFTFPKPINPPSPLFHRPPPSILHQKPPLTTVAKSFTSDEFPVDDTFIQTFGPKGKETEDEARRRNWIERGWAPWDEILTPEAEFARTSLNEGEEVPLSSPESIEAFKMLDPRYRKKKIKEMGLTEEEYLAKQFEIKGEIPEPLVTKWAGPLVVRLVPPRDWPPRGWEVDREELAFIREAHKVQAKRVRLEDIENGVRTETDDVCLDRYKVFLKQYKEWVEANKDILEEESYKIDQDYYPGRRKRGKDYKEGMYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRHHINVGMTVIVEITAKRDPYHFRFPIELRFVDPNIDHLIFNRFEFPPIFHREEDTNPDELRRDCGRPPVPRKDPRDKPEEEPLVSNHPYVEKLWQINVAEQMILNDMDINPDKYKGKKLSDLVDEDDINEENPVQYTKVQYKNALVPKVTMKTSVKELDLEAAIAEREHHRKLWKEAKDRGEEYKITTLKRNIEMDEYDFMHWRRSFEEREALIRDISCRKTLGLPLEEPGRYVDASFFGKDKYDPESPLYRYDYWGEPKHSEKSRKERMTDTHNKSIVAKGTVWCETPYEDSIKLVDEYTKQGEGAEEEEDDEDDDDEFDYILSKLANNVSDQIHVNGTETSRLSEGLFDD 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02825 661 ProSiteProfiles S1 domain profile. 270 338 IPR003029 GO:0003676
Trre5g02825 661 SUPERFAMILY Nucleic acid-binding proteins 266 324 IPR012340 -
Trre5g02825 661 MobiDBLite consensus disorder prediction 363 393 - -
Trre5g02825 661 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 38 645 IPR044967 GO:0000427|GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02825 Trre-Chr5 22525410 22534443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02825 - - gmx:100783002 1086.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02825 5 22525410 22534443 Trre5g02825 5 22525410 22534443 ECH