Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02823 ATGTTTGCATTTATTGAAGGATTAGTGAAGAAGCTTCTCATAGGAGAGAATTCACAAGTCCAAATGGAGAGCATTCACAAGTCTAAAGCTGAGAATGCAAGAGAGAAAATTTTATCTAGTCAATTTGATTATATCAAAGTTGATCATCAAATGAATGTCAAGATGGATCATAGGAATCAAAAAAGAGAAACTGACTCAGGACGTGTACCCAAGTTTGTTTATTCTCGTCAAAGAAAGAACACGGAGATCATAAGAGAGGTGATAGAAATTGACCCTAAAGTCGATTTTGCGAATCAGGAAGGAGAATTTGACTCAAGACATGAAACCAAGATTGCTTACGCTCATCACAAAATAAAAACCGAGACTGTAAAAGATGCGATAGGCAGTGTTAGTTCAATTTTTCCATATTTGAATAGTATTCCTCGGCGACCGCGAACAAAAATCAAGAGAAAATTCAAAGGCAATGTAGCTCTCTCTAGATCCAAGGAAAAGCTAAACAGTGGAGTCTTTGATTTCTACTTAGCGAAAATATGGAGGAGTTTCTCAGAAGATAGGATGAGGTCGTTTGCATACTTGGACAGCTTATGGTTTAGCCTTTATAGGAATGCTAAATGTAAAGATAAGGTGCTGAGTTGGATTAATAAAGAACATATTTTCACAAAGGAATACGTTTTTGTTCCTATAGTTTGCTGGGGTCATTGGAGCCTTCTGATCTTCTGCCATTTTGGCGAGAACTTGCAATCCTTTAGCAGATCACGTTGCATGTTGTTGTTGGATTCTCTTGAAATGGCCGATCCTAGACGGATTGAACCAGAGATAAGAAGATTTGTACAAGACATTTACAAAGCAGGGGACAGGCCAGAGACTAAGAGTCTTATATCTCAAATTCCATTTTTAGTGCCAAAGGTGCCACAACAAAAAGATGATACGGATTGTGGGAACTTTGTCCTCTATTTCATTAAATTGTTTCTAGAACTCGCACCTGATAATTTTAGCATGGAGGGGTACCCTTACTTTATGAAAAAAGATTGGTTCACCTTCGAAGAATTGGATAGTTTTTGTGAGAACTTGAAAAAGATGTCCCCAAATTTGAGTAGACTGGGCTAA 1107 0.3758 MFAFIEGLVKKLLIGENSQVQMESIHKSKAENAREKILSSQFDYIKVDHQMNVKMDHRNQKRETDSGRVPKFVYSRQRKNTEIIREVIEIDPKVDFANQEGEFDSRHETKIAYAHHKIKTETVKDAIGSVSSIFPYLNSIPRRPRTKIKRKFKGNVALSRSKEKLNSGVFDFYLAKIWRSFSEDRMRSFAYLDSLWFSLYRNAKCKDKVLSWINKEHIFTKEYVFVPIVCWGHWSLLIFCHFGENLQSFSRSRCMLLLDSLEMADPRRIEPEIRRFVQDIYKAGDRPETKSLISQIPFLVPKVPQQKDDTDCGNFVLYFIKLFLELAPDNFSMEGYPYFMKKDWFTFEELDSFCENLKKMSPNLSRLG 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02823 368 ProSiteProfiles Ubiquitin-like protease family profile. 148 323 IPR003653 GO:0006508|GO:0008234
Trre5g02823 368 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 36 359 - -
Trre5g02823 368 Pfam Ulp1 protease family, C-terminal catalytic domain 164 344 IPR003653 GO:0006508|GO:0008234
Trre5g02823 368 SUPERFAMILY Cysteine proteinases 160 339 IPR038765 -
Trre5g02823 368 Gene3D - 189 300 - -
Trre5g02823 368 Gene3D - 160 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02823 Trre-Chr5 22515518 22524182 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02823 - - cam:101493534 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02823 5 22515518 22524182 Trre5g02823 5 22515518 22524182 ECH