Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02804 ATGGCTTCAAGTGAAGGCGGCGACGGGAAACACAACCCTGCGTTTGACCCGGATTCGGATATTCCGGACAACCCGGAACACGAGTTTGCTGAATTCGGTGCGGGTTGTTTCTGGAGTGTGGAGCTAGCTTTTCAACGAGTTGTGGGAGTTGTGAAGACTGAAGTTGGATACACACAAGGTCATACACCAGATCCTAACTATAAATTAGTCTGCACCGGAACTACCAACCATGTCGAAGTTGTTCGGGTTCAATTTGATCCCAAAGTTTGTTCCTACACAAATCTCTTGACTCGGTTTTGGTCAAAACATGACCCTACTACCCTCAATCGCCAGGGAGGTGATGTGGGTGCACAATATAGATCAGGAATATACTACTACAATGAAACACAGGCACGTTTAGCCCAGGAATCAAAAGAAGCTAAACAGTTGGAACATAAAAATAAGATTGTAACAGAAATACTCCCAGCAAAGAGATTTTATAGAGCAGAGGAATATCATCAGCAATATTTGGAGAAAGGTGGAGGCAATGGCCTCGGTCAGTCTGCAGAAAAGGGCTGCACCGATCCCATAAGGTGCTATGGTTGA 585 0.453 MASSEGGDGKHNPAFDPDSDIPDNPEHEFAEFGAGCFWSVELAFQRVVGVVKTEVGYTQGHTPDPNYKLVCTGTTNHVEVVRVQFDPKVCSYTNLLTRFWSKHDPTTLNRQGGDVGAQYRSGIYYYNETQARLAQESKEAKQLEHKNKIVTEILPAKRFYRAEEYHQQYLEKGGGNGLGQSAEKGCTDPIRCYG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02804 194 FunFam Peptide methionine sulfoxide reductase 16 194 - -
Trre5g02804 194 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 29 172 IPR002569 GO:0008113
Trre5g02804 194 SUPERFAMILY Peptide methionine sulfoxide reductase 24 175 IPR036509 GO:0008113
Trre5g02804 194 Coils Coil 126 153 - -
Trre5g02804 194 Gene3D Peptide methionine sulphoxide reductase MsrA 15 194 IPR036509 GO:0008113
Trre5g02804 194 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Trre5g02804 194 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Trre5g02804 194 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 11 193 - -
Trre5g02804 194 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02804 Trre-Chr5 22307402 22309337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02804 K07304 - gmx:100527085 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02804 5 22307402 22309337 Trre5g02804 5 22307402 22309337 ECH