Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02787 ATGATTATTATACTATTCATCTTGGTTTGTGTTGGATTGAGCAATGGTGCCGATCAGAAAATACCCCTCCAAGGAAGAAAAGGGCAGTGGCATCTGCTTCTCAACAACACGGGCGTAGTTGGTATGCATACAGCATTAACATATGAAAACACCGTCGTAATGTTTGATCAAACTGAAGCTGGCCAATCTAGGTACAAACTTTGTAAACGCTTTAACGGAACCAGGTGTACAACAAACCGACATGATTTAACTGATTCAACATGTTTTGCTCATTCAGTAGAGTATGATATCAGTTCCAATAGAATAAGACCTTTGAGGCTAGACACTGATCCTTGGTGTTCCTCTGGTGCTTTCCTAAGCAATGGAACACTTTTACAAACAGGTGGATTTCATCAAGGTGCTAAAAGGGTTAGATACTATAGACCTTGCGGCGGGAATCATCACCAATGTGATTGGATACAATCAAAGAAATCTCTATCTGATCAAAGGTGGTATGCTTCTAGTCAGATTCTACCAGAACATGACAGAGTTGTTCTTGTTGGCGGAAAAAGAGTTTTCACATATGAATTTGTACCGAAAATTAGTCCTAATGAAAAATCATTCAACCTTCCGTTTCTGCACCAAACTAATGACAGGAATTCAGAAGGGAACAATTTATATCCATTCACTCACCTTTCATCGGACGGAAACTTGTTCATTTTCGCCAACCGCGATTCCATCTTACTTAACTTGAGACGCAATAGAGTAATCAAGACGTTCCCTCGGATTCCAGGAAATGGGTCGAGAAACTACCCGAGTTCCGGCTCATCCGTGTTACTACCGTTAGACCATAAAGACAATTTCCAGAAAGTTGAAGTTATGGTATGTGGCGGTTCTTCTACAGGAGCGCTTAATGCTGCTAGAAGAAAAAGATTCATTGAAGGTTTAAGATCTTGTGGGAGAATGGTGATCACAGGGAATAAACACAGATGGGAAATGGATTACATGCCGGAACCGCGTTTCTTACACGACATGATAATTCTACCTACAGGGAACATCTTGATTATAAATGGTGCTAAACATGGTTGTGCAGGATATGATAATGCTAGAAATGCTTCACTTGAACCTTATCTTTATAGTCCAAAAAAAAGACTAGGAAAAAGGTTCAGTATCCTTAAGAAAACAATGATAGCAAGAATGTATCATTCATCAGCAACTCTTCTTCCTGATGGTAGAGTATTAGTAGCTGGTAGTAACCCACATGGGGAATACACTTTTCACAATGTGGCATATCCAACTGAACTAAGACTTCAAGCATTTGTTCCACATTACATGGAAAAGAGGTATCATACTTGGAGGCCAAGTAACTTGACCATACAAAAGCATGCAATTCGGTACGGTAAAGAGTTTAATGTGACGTTTTTGTTGGGGAAGAGGCCGAGCGATGAAGTGAGGTGCAAGAGGATGGTGAGAAGTAGTAAGGGGTGGGTGCATGCAGTATTGGAAGCTCCACCATCATCTGTTGTTGCACCTTCTGGTTATTACTTGCTCACAGTGGTGAATGAAGGAATTCCAAGTTTGTCTCATTGGATTCAGTTTGCACACACTTAG 1590 0.4057 MIIILFILVCVGLSNGADQKIPLQGRKGQWHLLLNNTGVVGMHTALTYENTVVMFDQTEAGQSRYKLCKRFNGTRCTTNRHDLTDSTCFAHSVEYDISSNRIRPLRLDTDPWCSSGAFLSNGTLLQTGGFHQGAKRVRYYRPCGGNHHQCDWIQSKKSLSDQRWYASSQILPEHDRVVLVGGKRVFTYEFVPKISPNEKSFNLPFLHQTNDRNSEGNNLYPFTHLSSDGNLFIFANRDSILLNLRRNRVIKTFPRIPGNGSRNYPSSGSSVLLPLDHKDNFQKVEVMVCGGSSTGALNAARRKRFIEGLRSCGRMVITGNKHRWEMDYMPEPRFLHDMIILPTGNILIINGAKHGCAGYDNARNASLEPYLYSPKKRLGKRFSILKKTMIARMYHSSATLLPDGRVLVAGSNPHGEYTFHNVAYPTELRLQAFVPHYMEKRYHTWRPSNLTIQKHAIRYGKEFNVTFLLGKRPSDEVRCKRMVRSSKGWVHAVLEAPPSSVVAPSGYYLLTVVNEGIPSLSHWIQFAHT 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02787 529 SUPERFAMILY E set domains 442 525 IPR014756 -
Trre5g02787 529 Gene3D - 24 443 IPR037293 -
Trre5g02787 529 PANTHER SECRETED PROTEIN-RELATED 11 526 - -
Trre5g02787 529 Gene3D Immunoglobulins 476 529 IPR013783 -
Trre5g02787 529 Pfam Glyoxal oxidase N-terminus 42 291 IPR009880 -
Trre5g02787 529 SUPERFAMILY Galactose oxidase, central domain 93 438 IPR011043 -
Trre5g02787 529 Pfam Galactose oxidase-like, Early set domain 489 525 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02787 Trre-Chr5 22220245 22221903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02787 - - gmx:100814200 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02787 5 22220245 22221903 Trre5g02787 5 22220245 22221903 ECH