Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02727 ATGGACTCAGAACCTCAAAATTTGGAAATTACCGATTCTCTCTTTGTTTGGGATGAAAAATCACAGCTTTACTTCCACGCCAGTAGTGGATTTTATCATGACCCTAATGCTGGTTGGTACTATAACACCATTGATGGTGTTTATTACAAATTTGAGAATGGAAATTATGTACCTTTGAGTTCTAATAAGGATGATTTTGAAGAAACTAATGTGTGCAATGAAATCAAACGCGAAAGTCCTAAACAGATACATGGTATTGACAATGAGAATTGCCCTTCTTTCCTCGGAAACGAGACAGGAAACTTGACCGAGAAAGCAGCCGATGATGCAATGAACTCCACGAACAGTCCAACTTATGGAAACCCTCCACCGCCATCAGAATGGTTAGAGGACACGCTTATTGATCTTTACTTATCTGGCTACAACAACACGGCAGTTAGCGCAGCTGATACAGTGACGGTGCCAATGGAAACAGATGAATATAACTCCACATTGGAAGGTGGTGCTTACAGCAATACGTATGAAGTGGAAAATGAGTGGACCACAGGCCCAACGGACGAAAATGGCATGACTGAGAATAAAAGAATTGAAGATGAAGGCGTAGTTTACAACAATACTTATGAAGTGGAAGAAGGTGAGTGGATCCCAGGTCTAGAGGACGAAAATCTCATAGCTGATGGAAGTACTATAGATGAAGGTATCTTGTTGGATGAAGAAAAATGGCGAGCTCAGTATGGTCAAGTCATTGAGTCGAGAAAAGATTTGGTTTTAGAGTTTCCAGTTGTGGACTTGTGGGATTGGGAAATGGTTAGAGCATCCAAAAAGGATGGAAAGGATAAGATGGCAAGGTTGGTTGGAAGACTGGTCAAACAATCTGCAAAGCGACATCCATCTATCTCATCTGGTGAAAAGAAATTTAGATCTGCTTCTATATGTGAAGTACATCTCGATCTGGTACGCGTCAAAACAGGACAGGTATATAGATTGCGAAATCCTAGTGCAAAATATGTGGCTTCGTTATCAAGTTATGATTCCGCCGATCCAACAAAAGATTGGGATTTTCCTCGGTTATCATCTAATACAAATAGTGTGCATGTCTCTAAGTCCGGTGAAAGTATTCTTTCCACTTCAAATCAAGTTCATACGGAGAAGGAATTGTCTATGTTGCCCAGTCAGCTTTCTGCATCCAAGCAAATAAAAAGTCAATACAGAGATCGGGCGGCAGAGAGAAGAAATTTGCATGGAGGCTTTGGTGTAGGTCCAGGACAGAAGAACCTAGCTACTGGTGATGATACAGCATCATCACCTGATGCTTGTCCACAAGAAGCTGCAGAAGAGGCCTTGAAGAAGTCATTTGGAGCAGGCAGTTATGCCAGGAAACTTCTAGAAGGCATGGGCTGGAAGGAGGGAGAAGGGCTTGGCAGCTCTACAAAGGGCATGGTGGAACCTATTCAACCGGTTGGAAACATTGGCAGTGCAGGCTTGGGATGGCCTCATCGAAATTGA 1506 0.4256 MDSEPQNLEITDSLFVWDEKSQLYFHASSGFYHDPNAGWYYNTIDGVYYKFENGNYVPLSSNKDDFEETNVCNEIKRESPKQIHGIDNENCPSFLGNETGNLTEKAADDAMNSTNSPTYGNPPPPSEWLEDTLIDLYLSGYNNTAVSAADTVTVPMETDEYNSTLEGGAYSNTYEVENEWTTGPTDENGMTENKRIEDEGVVYNNTYEVEEGEWIPGLEDENLIADGSTIDEGILLDEEKWRAQYGQVIESRKDLVLEFPVVDLWDWEMVRASKKDGKDKMARLVGRLVKQSAKRHPSISSGEKKFRSASICEVHLDLVRVKTGQVYRLRNPSAKYVASLSSYDSADPTKDWDFPRLSSNTNSVHVSKSGESILSTSNQVHTEKELSMLPSQLSASKQIKSQYRDRAAERRNLHGGFGVGPGQKNLATGDDTASSPDACPQEAAEEALKKSFGAGSYARKLLEGMGWKEGEGLGSSTKGMVEPIQPVGNIGSAGLGWPHRN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02727 501 PANTHER RNA-BINDING PROTEIN 12 499 - -
Trre5g02727 501 MobiDBLite consensus disorder prediction 478 501 - -
Trre5g02727 501 MobiDBLite consensus disorder prediction 412 439 - -
Trre5g02727 501 Pfam OCRE domain 13 60 IPR041591 -
Trre5g02727 501 Pfam G-patch domain 456 496 IPR000467 GO:0003676
Trre5g02727 501 SMART G-patch_5 452 498 IPR000467 GO:0003676
Trre5g02727 501 ProSiteProfiles G-patch domain profile. 454 500 IPR000467 GO:0003676
Trre5g02727 501 MobiDBLite consensus disorder prediction 378 399 - -
Trre5g02727 501 CDD OCRE 13 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02727 Trre-Chr5 21694710 21698473 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02727 - - psat:127083673 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02727 5 21694710 21698473 Trre5g02727 5 21694710 21698473 ECH