Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02709 ATGGGTAGTGTGGAAATTGTTGAATTATCTAGTGATGATGAAAGTGAAAAAGTTGCTCCTGTAGCAACTGTTAAATTGGAGCCAGAATATGTTACAGGTGCCGAGAAATGGCGTTTGACTGGTGATCGGCGTCTAACCAAGCATAAGAAATCTCGAAGTCGTGCGACTAGACATGAGGCGGACGAAAATGTTAGTTATAGTAACTCCAGTGTATTGGAGCAGGGACCTTCGCCGGTCGATGACACTGGCGTATCTTATGCATCGTCCATTTGTCCAGCACCGCTTTCCAGACAGTTTTGGAAAGCTGGAAACTATGATGATGGGGTTGGTTCTCAAATTACAGTCCAAGGTGGAAAAAACTATCTACATGTACACCCGATGTTCCTTCACTCAAATGCAACTTCGCACAAATGGGCGTTTGGCGCCGTAGCAGAGCTTCTTGATAATGCTGTCGATGAGATTCAAAATGGAGCTACCTTTGTCATTGTAGATAAAACATCAAATCCAAGAGATGGAAGTCCAGCATTGCTGATTCATGATGATGGTGGTGGCATGGATCCAGAAGCAATGCGTCGCTGCATGAGTTTTGGATTTTCAGATAAAAATTCAAACCTTTCTATTGGACAATATGGCAATGGCTTCAAGACCAGTAGTATGAGGCTTGGTGCAGATGCTATAGTCTTCAGTCGTCATCTGAATAACGGGATTTTGACTCAAAGCATTGGACTTCTGTCGTATACATTTTTGATGCGAACACATCTTGACAGAATAGTAGTGCCGATGGTGAATTACGAGTTTAATACCTCAACTGAATCATTGGACATATTAAATGGCAAAGAACATTTTATGGCGAATTTATCATTGCTGTTACGTTGGTCACCATATTCATCAGAAACAGATCTTCTAAAACAATTTGATAACATGGGATCTCACGGCACTAAAGTTATGGTCTACAATTTGTGGTTTAATGATGAGGGGATTACAGAGTTAGATTTTGATACAGATCCCAAGGATATTCGTATTGCTTGGGATATCAAGAAGGTCAGCACTAAACCTGCATGGAAGAAAATCCAGGAGGAACATATTGCTAAGCGATTTCGTTACTCATTACGTGTATACTTGTCCATATTGTACTTGCGGTTACCAACAACTTTCCAAATTATATTGAGAGGGGAAGCTGTGACGCCACATAGCATTGCCGATGATCTTAAACTTGTTGAATTTGTCAAATATACACCACAATGTAGCGGACACGTAGAGGAACTTTTTGTAACAATTGGATTTCTTAAGGAAGCCCCTCATGTCAATATCCATGGTTTCAATGTATATCACAAACATCGGCTGATACTGCCGTTTTGGCAGGTTGTAAGATATACAGACAGTAGAGGGAGAGGAGTTGTTGGTATCATGCAAGCAGATTTTGTTGAGCCAACTCATGATAAACAAGATTTTGAGAAAACTTCCCTGTTTCAAAAGTTAGAAGCCCGCTTGAAGGCAATGACATGGGAATACTGGGATACTCATTGTAGATTAATTGGGTATCGGCCAGAAGTTAAGTCTCGAACTCCAGTTACTCAACCACATCCATCATTGCAAAAACCACTTGGATATCATAATAAGAGGAAGACAGATGAACTGATAAACCTTCAGAAGAGGAAAAAACATGCAAGTGAAGAATATTTATCTGATGTTGGTTTCAGTCAGAATAAACAGGTCACCACAACTCCTGCAGACCAGGTTGTAAATCCAGAGACTATAAATTTGATACAAGAAAATAAGAAACTACGTGCAACATGCATGGAATTTGAAAGGAGAGGGGAAGAACTTAATTTCAAGGCAACGGAGCTTAGAAGTAAAATAGAGGAAGCCCAACATGAATATAATCGGCTTTTAGCTGAACTGCAGTCCCTAGATGTGAAAGAAGAGTAG 1929 0.4028 MGSVEIVELSSDDESEKVAPVATVKLEPEYVTGAEKWRLTGDRRLTKHKKSRSRATRHEADENVSYSNSSVLEQGPSPVDDTGVSYASSICPAPLSRQFWKAGNYDDGVGSQITVQGGKNYLHVHPMFLHSNATSHKWAFGAVAELLDNAVDEIQNGATFVIVDKTSNPRDGSPALLIHDDGGGMDPEAMRRCMSFGFSDKNSNLSIGQYGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTFLMRTHLDRIVVPMVNYEFNTSTESLDILNGKEHFMANLSLLLRWSPYSSETDLLKQFDNMGSHGTKVMVYNLWFNDEGITELDFDTDPKDIRIAWDIKKVSTKPAWKKIQEEHIAKRFRYSLRVYLSILYLRLPTTFQIILRGEAVTPHSIADDLKLVEFVKYTPQCSGHVEELFVTIGFLKEAPHVNIHGFNVYHKHRLILPFWQVVRYTDSRGRGVVGIMQADFVEPTHDKQDFEKTSLFQKLEARLKAMTWEYWDTHCRLIGYRPEVKSRTPVTQPHPSLQKPLGYHNKRKTDELINLQKRKKHASEEYLSDVGFSQNKQVTTTPADQVVNPETINLIQENKKLRATCMEFERRGEELNFKATELRSKIEEAQHEYNRLLAELQSLDVKEE 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02709 642 FunFam MORC family CW-type zinc finger protein 4 125 326 - -
Trre5g02709 642 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 141 233 - -
Trre5g02709 642 MobiDBLite consensus disorder prediction 62 79 - -
Trre5g02709 642 Coils Coil 539 559 - -
Trre5g02709 642 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 53 638 IPR045261 GO:0016887
Trre5g02709 642 Coils Coil 606 640 - -
Trre5g02709 642 MobiDBLite consensus disorder prediction 41 79 - -
Trre5g02709 642 Pfam Morc6 ribosomal protein S5 domain 2-like 368 505 IPR041006 -
Trre5g02709 642 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 139 344 IPR036890 -
Trre5g02709 642 Gene3D - 127 274 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02709 Trre-Chr5 21524174 21535619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02709 - - gmx:100795667 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02709 5 21524174 21535619 Trre5g02709 5 21524174 21535619 ECH