Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02707 ATGGGTTCTTTTCTGAGTTCACAGAATACTCGGATGACCAAAGAAGAAATGGAAACTGCTTTGAATAAAGCTAAGGAGATCGCTTCCTCTTCCCCCGTCGTTGTTTTCAGTAAGACTTACTGTGGTTACTGTAATCGGGTCAAGGCTCTACTCAAACAGCTAGGAGCAACCTACAAGGTCCTTGAATTGGATACAGAAAGTGATGGGGGTGATATTCAAGCAGCTTTAGCTGAGTGGACAGGGCAAAGGACAGTACCTAATGTGTTTATTGGAGGCAAACACATTGGTGGTTGTGACTCTGTCTTGGAGAAACACCATGCAGGTCAATTGATTCCCCTTCTCAATGATGCTGGAGCTATTGCCAATAACTCTGCTCAGCTCTGA 384 0.4453 MGSFLSSQNTRMTKEEMETALNKAKEIASSSPVVVFSKTYCGYCNRVKALLKQLGATYKVLELDTESDGGDIQAALAEWTGQRTVPNVFIGGKHIGGCDSVLEKHHAGQLIPLLNDAGAIANNSAQL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02707 127 PANTHER GLUTAREDOXIN 2 12 120 - -
Trre5g02707 127 SUPERFAMILY Thioredoxin-like 22 120 IPR036249 -
Trre5g02707 127 ProSiteProfiles Glutaredoxin domain profile. 21 121 - -
Trre5g02707 127 FunFam Glutaredoxin 2 18 127 - -
Trre5g02707 127 Gene3D Glutaredoxin 12 127 - -
Trre5g02707 127 PRINTS Glutaredoxin signature 78 91 IPR014025 -
Trre5g02707 127 PRINTS Glutaredoxin signature 92 105 IPR014025 -
Trre5g02707 127 PRINTS Glutaredoxin signature 33 51 IPR014025 -
Trre5g02707 127 CDD GRX_GRXh_1_2_like 32 113 - -
Trre5g02707 127 NCBIfam glutaredoxin 33 112 IPR011899 -
Trre5g02707 127 Pfam Glutaredoxin 33 95 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02707 Trre-Chr5 21475919 21479661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02707 18 120 Miscellaneous Gene Families AT3G02000 42.202 8.75e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02707 K03676 - qsu:111991481 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02707 5 21475919 21479661 Trre5g02707 5 21475919 21479661 ECH