Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02706 ATGGCTCAAACTATCTTCTCCTCTTCCTCCACACTCTCTTCTTCTTCCTTCTTTCACCGCTCTCACACTACGAACCTCTCCCTCCGAACCTCTTCCATAACCTATCCATTTTCTTCTCCGATTCGCCGAACCACCATTTCCATTGCTGCTGCTGCTAACATCGCCGTTCGTCCCAATGCTGTTTCTCCCATTGAATCTGTTACTCAGCTAATTGAATCGTTGATTAATGGTGTTGATTTGTCCGAAGCTGAAGCTGAATCGTGTCTTCACTTATTGTTGAATGAAGCTAATGAATCTTTGATTAGCGCTTTTCTCGTGCTTTTGAGAGCTAAAGGAGAAACTGTTGAAGAAGTGGCAGGGTTGGCGAAGGCTATGATGAAACATGCTACAAAGGTTGAAGGTTTGGTTGATGTGGTTGACATTGTTGGCACAGGAGGGGATGGTGCAAACACCGTTAATATTTCAATGGGAGCTTCCATTCTTGCTGCTGCTTGTGGAGTAAAAGTTGCAAAGCAAGGAAATCGTTCAAGTTCTTCCGCATGCGGTAGTGCTGACGTGTTAGAAGCATTGGGAGTCGTTATTGACTTGGGTCCTCAGGGGGTTAAAAAGTGTGTGAATGAAGTGGGAATTGGATTTATGATGTCTCCAAAGTATCACCCTGCAATGAAGATTGTCAGGCCTGTAAGAAAGCAGCTCAAAGTAAGAACTGTATTCAATATATTGGGTCCAATGTTAAACCCAGCACAGGCCCCTTTTGCAGTTGTTGGTGTATACACAGAAGACTTGGTTTTCAAAATGGCCAAATCGCTTGATAGATTTGGCATGAAAAGAGCTTTAGTTGTCCACTCTGAAGGTTTGGATGAAATAAGTCCTCTTGGACCTGGTCTGCTGCTTGATGTTACTCCAGAAGGGATTGATAAATTCTCATTTGATCCCTTGGAGTTTGGCATTCCTCGGTGCACTCTTGAAAGCTTAAAAGGCGGTGACCCAAAATACAATGCAGAGGTTCTCAAACGTGTTTTGGGTGGAGAGAGAGGACCTATTGCAGATGCTTTTGTTCTCAATGCTGCAGCAGCCCTCTTGGTCAGTGGCTTTGTGAGGAACCTAGCTGAAGGGGTGTCTTTGGCGCGTGAAACACAACAATCAGGAAAAGCTCTCAAGACTCTCAACTCTTGGAGGGATATCTCAAATAAAATAAAAGATGCAGGGGACATATAA 1218 0.4409 MAQTIFSSSSTLSSSSFFHRSHTTNLSLRTSSITYPFSSPIRRTTISIAAAANIAVRPNAVSPIESVTQLIESLINGVDLSEAEAESCLHLLLNEANESLISAFLVLLRAKGETVEEVAGLAKAMMKHATKVEGLVDVVDIVGTGGDGANTVNISMGASILAAACGVKVAKQGNRSSSSACGSADVLEALGVVIDLGPQGVKKCVNEVGIGFMMSPKYHPAMKIVRPVRKQLKVRTVFNILGPMLNPAQAPFAVVGVYTEDLVFKMAKSLDRFGMKRALVVHSEGLDEISPLGPGLLLDVTPEGIDKFSFDPLEFGIPRCTLESLKGGDPKYNAEVLKRVLGGERGPIADAFVLNAAAALLVSGFVRNLAEGVSLARETQQSGKALKTLNSWRDISNKIKDAGDI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02706 405 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 135 404 IPR035902 -
Trre5g02706 405 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 64 397 IPR005940 GO:0000162|GO:0004048
Trre5g02706 405 Pfam Glycosyl transferase family, helical bundle domain 69 129 IPR017459 -
Trre5g02706 405 Hamap Anthranilate phosphoribosyltransferase [trpD]. 69 395 IPR005940 GO:0000162|GO:0004048
Trre5g02706 405 FunFam Anthranilate phosphoribosyltransferase, chloroplastic 52 133 - -
Trre5g02706 405 Pfam Glycosyl transferase family, a/b domain 137 386 IPR000312 GO:0016757
Trre5g02706 405 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 67 132 IPR036320 -
Trre5g02706 405 FunFam Anthranilate phosphoribosyltransferase 133 398 - -
Trre5g02706 405 NCBIfam anthranilate phosphoribosyltransferase 71 393 IPR005940 GO:0000162|GO:0004048
Trre5g02706 405 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 137 393 IPR035902 -
Trre5g02706 405 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 57 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02706 Trre-Chr5 21467561 21471017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02706 K00766 - gmx:100794615 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02706 5 21467561 21471017 Trre5g02706 5 21467561 21471017 ECH