Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02704 ATGAGCGGCTCACCGGATCCGTTGGATTCATTTCCTCCGCTACGTCTTCGTCAATCGGACGCCACCTCTCGCCGTTCTTCCTTCGGCGCCGATTCCGAATTAGAACGTTACTGCAGCGCTAATTCAATGATGGGAACACCGAGCACAAGTATGAGCCTTCACAGTGCCATCACCGTTTTCCATGATTTCTCCGATATCGATTTCGGTTCTTCTAGACGCTTCGATGATGGAATTGCGACGGAAACAAATCGGAAGAATTTTAAGTATGGTTCGAGTGGTTTGGAATTGTACGGTGATGATTGTGATGAGCTTGATATCACCGGTCTTGATTCGTCGGAGTTGATCGGAAATAACCGAACTGAAGAACAATTTGTTGCGAATGAAAATGGAGGTGAAGTTGGGGAAAAAGAGATTGAGAGGGAAGAAGAAGAAGAGGAATTTTCGGAAGGTGAGGAATCTATGTTCAATTATGGGAGTGGTTGTGATGGTGATAATGAGAATGAGTTTGATTCGTCGAAAGGTCAAAATGAGAAGAATGAGTTTTATTTTTCGAGGAATTTGCATTTATATGAGGGAATAGAAGTTCCAAATGAGAATCCATTGTTTATGAATTCTTCTGTGGCTTTTGGTTCACATGATTTGGAAGATTTTTTGCTACAAAATGGACCAGTTGCTGTTGATTCTGATCTGTTTCGCAATCCGCGAGAAAATAATAATCGAGTTGAAGAAGATGGAGTAAGTTCCGGTCAAAAGGATTGGAAGAACGTGGTCATTGTCAATAATGAATTTGAAGAAACAAAGGATATTGGTAATCCAGAAGCTATAGAAGAGCTGAGGGATAGGGATACAGATAGGGCCATCGACAAATTAGTTGGTTCTTCTGAAACTTCTTCTATCTGTGAGGCTGATTTGGGTCTGCTGCCAGAAGAAGATCCTCAGAAGGATTTGCATGTTACTGATGGTGGAAATGAGGGAAAGGGGAATCAGTATATTAATAGTGATGAAGCCGGTGCCTCTGGGGATGTTCAATTGGAAAATCCGGAGTTGGATGATTCTGAATTGAAGTTTGACGACTTTGTAAGTTCTTCCGGTGCATCTGTTCATGTAGGGAATGTGAATGCAAAATCATCTGAGAACCTTAAACCAGTTGTGTTGCCATCAAACGGTGCAATGAGGAAAACGTTAGAGAGGTCTTCCACTTCGACAAATGTATTAGGAGACAGCCATGTGATACCTAAGATAGAGGACCTTGAGCTAAATGAATTCTACGATGAGGTTGTTCAGGACATGGAAGAAATTTTACTGGAGTCTATGGATTCTCCTGCAACTAGGTTTTCTGCGGGTAACACACAACTGTCTATGCCTTCAAGAGATGGTGGGTTGACTGCTTCTACTTCTAGGACAGATGATGCTTACCTGATAGTCCAGCGCCCAAGAAGAATAGATAGGATAGAAGTGGTAGGTGCAAGGCAGAAAAGAGGGGATGTTTCTTTTAGTGAAAGATTGGTTGGGGTGAAGGAATACACTGTTTATAAAATAAAAGTGTGGAGTGGCAAGGATCATTGGGAGGTTGAAAAGCGATATCGTGATTTCTTAACTCTTCATCGTTGCATGAAAACCTTATTCAACGAGCAAGGCTGGACTTTACCTTTGCCTTGGTCTTCCGTTGAAAAGGAATCAAAGATATTTAGAAGTGCATCTCTTGATATTATTGCAAAGAGAAGTGTTCTTATTCAAGAGTGTTTGCAGTCTATTCTCTCTTCCAGGTTCTTTTCAAGTCCTCCTAGAGCACTTGTTTGGTTTTTGTCCCCTGAAGATTCACATCCCAGTTCACCTGTGACAAATTCGCCAGTGTCTCTGTCTTCTTTTACAAGAGGGGAAAACATTAGAAACTCTTCCACTTGGGGGAAGACCATATCCCTTATTGTTGAAATTCCATCAAATAAATCAACGAGGCAGTTGTTAGAAGCTCAACATTACACCTGCGCTGGGTGCCATAGGCATTTTGATAATGGAAATACTTCAATTTGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTTTGTGAATATACTGGTCAAATGTTCTGCTCTTCTTGCCATACAAATGATACTGCGGTCTTGCCGGCAAGGGTTTTGCATCATTGGGATTTCACTCATTATCCTGTTTCTCAGCTGGCAAAGTCATATCTGGATTCTATACATGAACAGCCCATGCTTTGTGTCACTGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTACTTCATGTTATGAGTGTCAGGAAAAAGATAGGAACAATGCTCCCATATGTTCGCTGCCCGTTCCGGAGGTCTATCAACAAAGGAGTTGGAAATCGGAGATATCTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAAAGGAGTCTTTGCTGCACTTCCTGTAATGGTGGAAACTGTATCGAGGAAAATCCTAGAACACATTACTGATCAATGTCTCGTATGCTGTGATGTGGGAATCCCGTGTAGTGCCCGACAAGATTGCAGTGACCCATCTTCTCTCATTTTCCCATTTCAGGAAGACGAAATAGAAAGGTGCAAATCTTGTCAGTCGGTTTTCCATAAGCGTTGCTTTAGAAAGGCTGCAAATTGTCCTTGTGGGGAACAGCTGAAACTGAACAAGACGATGAGTTTAACTAACAGAGTAGGCCAATGGGGTGGTGGTGGTGGAACGAGAGGAGCTTTGGACTTGTTAGGCAAGGGACTGAGTTCTGGGCTGTCACCTCGGTTTCTCTCTGGATTATTTACAAAAGAAAAGCATGATAAAACAAGGGAGCATCAAGGAGAAAATATCATCTTAATGGGTTCCTTACCAAGCAATTCTTTATGA 2898 0.4206 MSGSPDPLDSFPPLRLRQSDATSRRSSFGADSELERYCSANSMMGTPSTSMSLHSAITVFHDFSDIDFGSSRRFDDGIATETNRKNFKYGSSGLELYGDDCDELDITGLDSSELIGNNRTEEQFVANENGGEVGEKEIEREEEEEEFSEGEESMFNYGSGCDGDNENEFDSSKGQNEKNEFYFSRNLHLYEGIEVPNENPLFMNSSVAFGSHDLEDFLLQNGPVAVDSDLFRNPRENNNRVEEDGVSSGQKDWKNVVIVNNEFEETKDIGNPEAIEELRDRDTDRAIDKLVGSSETSSICEADLGLLPEEDPQKDLHVTDGGNEGKGNQYINSDEAGASGDVQLENPELDDSELKFDDFVSSSGASVHVGNVNAKSSENLKPVVLPSNGAMRKTLERSSTSTNVLGDSHVIPKIEDLELNEFYDEVVQDMEEILLESMDSPATRFSAGNTQLSMPSRDGGLTASTSRTDDAYLIVQRPRRIDRIEVVGARQKRGDVSFSERLVGVKEYTVYKIKVWSGKDHWEVEKRYRDFLTLHRCMKTLFNEQGWTLPLPWSSVEKESKIFRSASLDIIAKRSVLIQECLQSILSSRFFSSPPRALVWFLSPEDSHPSSPVTNSPVSLSSFTRGENIRNSSTWGKTISLIVEIPSNKSTRQLLEAQHYTCAGCHRHFDNGNTSIWDFVQTFGWGKPRLCEYTGQMFCSSCHTNDTAVLPARVLHHWDFTHYPVSQLAKSYLDSIHEQPMLCVTAVNPFLLSKVPALLHVMSVRKKIGTMLPYVRCPFRRSINKGVGNRRYLLESNDFFALRDLIDLSKGVFAALPVMVETVSRKILEHITDQCLVCCDVGIPCSARQDCSDPSSLIFPFQEDEIERCKSCQSVFHKRCFRKAANCPCGEQLKLNKTMSLTNRVGQWGGGGGTRGALDLLGKGLSSGLSPRFLSGLFTKEKHDKTREHQGENIILMGSLPSNSL 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02704 965 MobiDBLite consensus disorder prediction 307 321 - -
Trre5g02704 965 Pfam Putative zinc-RING and/or ribbon 689 893 IPR025258 -
Trre5g02704 965 Pfam PX domain 516 603 IPR001683 GO:0035091
Trre5g02704 965 CDD PX_domain 496 595 - -
Trre5g02704 965 Gene3D - 492 611 IPR036871 GO:0035091
Trre5g02704 965 MobiDBLite consensus disorder prediction 137 151 - -
Trre5g02704 965 MobiDBLite consensus disorder prediction 305 344 - -
Trre5g02704 965 SUPERFAMILY PX domain 501 607 IPR036871 GO:0035091
Trre5g02704 965 SMART DUF4206_2 689 894 IPR025258 -
Trre5g02704 965 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 27 900 - -
Trre5g02704 965 ProSiteProfiles PX domain profile. 489 608 IPR001683 GO:0035091
Trre5g02704 965 MobiDBLite consensus disorder prediction 133 155 - -
Trre5g02704 965 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02704 Trre-Chr5 21451863 21457715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02704 - - gmx:100800081 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02704 5 21451863 21457715 Trre5g02704 5 21451863 21457715 ECH