Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02703 ATGAGTTTTCTAACAGGGTCTCCTAAAGGCTCTTGGGAACCTATTATGACTGTTAAGACAAATACTCAGAGTTATTGGCTTAATTGGAGGGTTTTGCTTTGTTCCATTTGGGTTTTGCTTTCAATCATTTTCTCATTATTGCTTATATTGAAGTATGAAAAACTTTTAAGAAATGCTTCATCAAGTAATGGTAGTGAAACTGAAAGGGAAACACAAGAAGAAGAAAATTCAGCAATTTTGTATGAGGATGAAACTTGGAGACCATGTTTAAAAGGAATTCACCCTGCTTGGCTTTTGGCTTTTAGAATTTTTGCATTTTTTGTTCTTTTGGTTCTTCTCACTTTCAATGCTGTTGTTGATGGAGGAAGCATTTTCTATTATTACACTCAGTGGACATTTGCTTCAATCACATTTTACTTTGGGCTAGGATCAATACTCTCCATGCAAGGATGTTACAAACATCATAAGAAATCAAGAGGTGATAAGGTTGATCATGTGGATGGAGATGCAGAACAAGGAATGTATCATGCTCATGTACTCCCACAAAGTTCTTATGCATCAAAACATGACAAAAATATGGGAATTTCAGAAGTTGGTGTTCTTCTTCGCCAACATGCAAGCACTTGGGGTTATATTTTTCAAATCATATTTCAGATAAATGCAGGCGCGGCATTGCTTACTGATTGTGTATTTTGGTTTGTATTTGTTCCATTTCTAACCATCAAAGATTACAATCTAAATTTTTTGGTAATCATTATGCACTCAATCAATGCTATTTTCCTCATAGGTGATACAGCTTTAAATTCTTTGCCTTTCCCTTGGTTTCGAATGGGATACTTTTGCTTATGGACAGTTACATATGTGATTTTCCAATGGATTGTTCATGCTTGCATTAATCTCTGGTGGCCTTATCCATTTCTTGATTTGTCATCCTCATTTGCTCCACTATGGTACTTTGCTGTGGCATTACTGCATATTCCATGCTATGGTATTTTCAATTTGGGAATGAAGCTCAAACATTATGTCTTGGCAACGCGCTACCCCGACTCATACTGTGTTAGACTTAGATGA 1071 0.3604 MSFLTGSPKGSWEPIMTVKTNTQSYWLNWRVLLCSIWVLLSIIFSLLLILKYEKLLRNASSSNGSETERETQEEENSAILYEDETWRPCLKGIHPAWLLAFRIFAFFVLLVLLTFNAVVDGGSIFYYYTQWTFASITFYFGLGSILSMQGCYKHHKKSRGDKVDHVDGDAEQGMYHAHVLPQSSYASKHDKNMGISEVGVLLRQHASTWGYIFQIIFQINAGAALLTDCVFWFVFVPFLTIKDYNLNFLVIIMHSINAIFLIGDTALNSLPFPWFRMGYFCLWTVTYVIFQWIVHACINLWWPYPFLDLSSSFAPLWYFAVALLHIPCYGIFNLGMKLKHYVLATRYPDSYCVRLR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02703 356 PANTHER UNCHARACTERIZED 41 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02703 Trre-Chr5 21448348 21450965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02703 - - gmx:100799543 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g02880 15 25023390 25025625 Trre5g02703 5 21448348 21450965 ECH
Trre5g02703 5 21448348 21450965 Trre5g02703 5 21448348 21450965 ECH
Trre9g02172 9 23264986 23269355 Trre5g02703 5 21448348 21450965 ECH
Trre15g02880 15 25023390 25025625 Trre5g02703 5 21448348 21450965 PCT