Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02696 ATGGCTGATTTGGTTCAAGAGGAACAACAACAAGTTGTTGTTGGTATTGACGACAAGCGTGTACATTTGGAGCAAGGAGAAAAAGATATGGGTCCTGTTACAGGCAATTCAATTCATAGATCAAGTTCAAGGCCTCAACTTGATGTTAGTAAAGCTGAAATTCAATCTAATGTTGAGGATAAGTATCCCACTATTTTGTTGCCTAATCAATCTGATGATTTGTCTCATCTCGCTCTTGATATTGGAGGATCTTTGATAAAGTTGGTGTACTTTTCGAGACATGAAGGCCAATCGGATGATGATAAAAGGAAGAAAACATTGAAGGAGCGATTGGGGCTTTCTAATGGTAATAGGAGAAGCTTTCCTATTCTTGGGGGAAGGCTTCACTTTGTGAAGTTTGAAACAAGGAAGATCAATGAGTGCTTAGATTTCATTCATTCAAAGCAGCTTCACCGTGGTGGGTTGGAGTCACGTTACTCCGATTCTGTGGCTGATCAAAATGCCATAATTAAGGCTACTGGTGGTGGAGCGTACAAGTATGCTGATCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTCGCTGGAGCGAATTTCTTGCTTAAGGCAATACGTCATGAAGCTTTCACACACATGGAAGGCCAGAAAGAGTTTGTTCAAATTGACCATAATGATTTGTTCCCTTATCTTCTAGTTAATGTTGGTTCCGGTGTTAGTATGATCAAGGTTGATGGGGATGGAAAGTTTGAGAGGGTTAGTGGGACAAATGTTGGCGGTGGTACTTATTGGGGCCTGGGAAGACTGTTAACTAAGTGCAAGAGCTTTGATGAGTTGCTTGAGCTAAGCCAGAAAGGGGATAATAGTACTATCGACATGCTTGTTGGGGATATTTATGGTGGTTTGGATTATTCAAAGATTGGTCTATCCGCTTCAACTATTGCTTCAAGTTTTGGGAAAACTATATCAGAAAAAAAGGAACTTGAAAACTACAGACCTGAAGACATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATAGCTTACTTAAATGCATTGCGATTCAAGTTGAAGAGAATCTTTTTTGGAGGATTTTTTATCAGGGGTCATGCTTATACCATGGACACTATATCTTTTGCTGTTCAATACTGGTCTAATGGGGGGGCCCAAGCAATGTTTTTGCGACATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAAAAGCATGGTTTAGATGATCTCATGGTGCATCAGTTAGTTGAAAGGTTTCCAATGGGTGCTCCATATACTGGTGGCAAGATACATGGCCCGCCACTTGGAGATTTGAATGAGAAGATTTCGTGGATGGAAAAGTTTTTGCAAAAGGGAACAGAAATTACTGCACCTGTGCCGATGACTCCCGTTGCCGGAACTACTGGACTGGGAGGTTTTGAAGTCCCTTTGTCAAAAGGAAGTGCTCTGCGATCTGATGCGAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACTTTGGAAGTCTTTCCGTTGTTAGCAGACCCAAAATTGTATGAGCCCAATACAATTGATCTTGCAGATCCCAAGGAATTAGAATATTGGCTCACTATTTTGTCAGAGCACTTACCAGATCTTGTAGACAAGGCTGTTGCTAGTGAAGGTGGAACTGATGATGCTAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACTTGGCAAGGTTAATGGAGGAGCCTTCTGCATATGGGAAGTTAGGTCTGGCCAATCTATTGGAAATGAGGGAAGAGTGCTTGAGGGAATTTCAGTTTGTTGATGCCTACAGAAGTATAAAGCAGAGGGAAAATGAAGCATCACTTGCTGTTTTACCTGACTTGTTTGTAGAACTTGATGGCATGGACGAGGAAACCAGACTCCTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTAGATCTCTATCATAAAGGAACAATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCGCAGACCTTGGCGGGTTGATGATTTTGATGTCTTCAAAGAGAGAATGTTAGGGGCTGGGGACAAGAAGTTGCCCCCTCATAGAAGAGCTTTACTTTTTGTTGATAATTCAGGTGCTGACATTGTTCTAGGGATGCTTCCACTGGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTTGTTGCAAACTCGCTTCCTGCTTTAAATGATGTGACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGCGACATTCTAAGGCGAGCTGCTGAAGCTGGGGGCTTGCTTGTCGATGCAATGATTAATACAGATAACTCTAAAGAAAATTCATCTTCGGTCCCCTTGATGGTTGTTGAGAATGGATGTGGCAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGTTGGCTGCTGCAGCAAAAGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGATCTCTGCATACTAACCTCTATGCTCAATTCAAGTGTGATGCTCTGAAGCTTGCGATGGTGAAAAATCAGCGGTTGGCTGAAAAGTTGATTAAAGGGAACATATATGACTGTATTTGCAAATACCAGCCTGCTAGTTGA 2691 0.4199 MADLVQEEQQQVVVGIDDKRVHLEQGEKDMGPVTGNSIHRSSSRPQLDVSKAEIQSNVEDKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEGQSDDDKRKKTLKERLGLSNGNRRSFPILGGRLHFVKFETRKINECLDFIHSKQLHRGGLESRYSDSVADQNAIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDHNDLFPYLLVNVGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNSTIDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELENYRPEDISLSLLRMISYNIGQIAYLNALRFKLKRIFFGGFFIRGHAYTMDTISFAVQYWSNGGAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPVAGTTGLGGFEVPLSKGSALRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLADPKELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLFVELDGMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDVFKERMLGAGDKKLPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTDNSKENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLYAQFKCDALKLAMVKNQRLAEKLIKGNIYDCICKYQPAS 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02696 896 Pfam Damage-control phosphatase ARMT1-like domain 604 882 IPR002791 -
Trre5g02696 896 SUPERFAMILY Actin-like ATPase domain 187 419 IPR043129 -
Trre5g02696 896 Pfam Fumble 76 418 IPR004567 GO:0004594|GO:0005524|GO:0015937
Trre5g02696 896 SUPERFAMILY AF1104-like 513 894 IPR036075 -
Trre5g02696 896 Gene3D - 532 619 IPR035073 -
Trre5g02696 896 FunFam Pantothenate kinase 2 215 400 - -
Trre5g02696 896 MobiDBLite consensus disorder prediction 24 49 - -
Trre5g02696 896 FunFam Pantothenate kinase 2 68 228 - -
Trre5g02696 896 NCBIfam type II pantothenate kinase 76 419 IPR004567 GO:0004594|GO:0005524|GO:0015937
Trre5g02696 896 MobiDBLite consensus disorder prediction 35 49 - -
Trre5g02696 896 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 698 894 - -
Trre5g02696 896 Gene3D - 300 409 - -
Trre5g02696 896 FunFam Pantothenate kinase 1 76 214 - -
Trre5g02696 896 SUPERFAMILY Actin-like ATPase domain 75 215 IPR043129 -
Trre5g02696 896 PIRSF PanK_long 30 896 IPR015844 GO:0004594|GO:0015937
Trre5g02696 896 Gene3D - 68 228 - -
Trre5g02696 896 PANTHER PANTOTHENATE KINASE 46 789 IPR004567 GO:0004594|GO:0005524|GO:0015937
Trre5g02696 896 FunFam Pantothenate kinase 2 533 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02696 Trre-Chr5 21356329 21366940 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02696 K24265 - gmx:100781580 1604.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02696 5 21356329 21366940 Trre5g02696 5 21356329 21366940 ECH