Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02685 ATGGAATCAACTTCAACATTCCCTCAGCAACAACATATTTGGGATCATCATCACGAAGAAGACTCCTCCTCCATTGTCTCCGATTCCGAAAGCGGTGTTTCCGGCACCACCGGAGAAAAACAAAAACAAGATTCTAATTCGTGTTTAGTTAGGCTTGAAGAAGGTGACACTGTTCACGATCTATTAAAGACGAGGTTTCTTCGTGGACTCGGCTTGATTTCGACGAAAACAGAGATTCTAGCAATTCACAGAAACGCATGTTCTGATGTAGTTTCACAAGCGAGGCTTCAATCCTTTCATGTTTACGCAGAAGCTGTTTCCAAAATTCGCGGTGGAAACATAGTCACAGAATTCGCCGGTTTAATGGCGAACCGCGAACCGGTTCGCGCGAACCGCTATGGTGAGAATGACGTTAGAGACATTCTTTCAAATGGTTTCAGTCATGTTCATGGTTCTAGCCTCTCCCTCTCTCCAGATGATTCTCCTCTTCAGAGTGTGAAAAGCTGTTTTGTTGGAAGAGATGGTGTGAGGCATTTGATACTATGCAGGGTTATTTTGGGAAGAACAGAAATTGTGCAATCTGACACAAAACAATGTTATCCAAGTTGTGAAGATTATGATTCTGGTGTGGATAATATTTCAGCTCCAACCAAATACATGATTTGGAGTAGTAGAATGAATACTCATGTTTGGCCTGCATATCTTATAAGTTTCAAGGTTTCTTCCTCAAAAGGGGTTGAGATGAATGAAGATAAACATGTGAAACCAACTTCACCTTGGATGCCTTTTCCAATTTTGATTTCTGTGCTTTCCAAAGTTTTGCCATCACTTGATATTGCACTGATTTGCAAGTTCTACAAGGCTAAAAAGGAAGGAAAGATCTCAAGACATGAATTGATACAAAAAGTGAGACAAATTGCTGGAGACAAGTTGCTAATTTCGGTCATTAAGTCTTATAGAGCCAAGAAAAAACCTGCAAGTTTTCAGCAAACAAAGTCAAAGAATGGCATCTAA 1014 0.4034 MESTSTFPQQQHIWDHHHEEDSSSIVSDSESGVSGTTGEKQKQDSNSCLVRLEEGDTVHDLLKTRFLRGLGLISTKTEILAIHRNACSDVVSQARLQSFHVYAEAVSKIRGGNIVTEFAGLMANREPVRANRYGENDVRDILSNGFSHVHGSSLSLSPDDSPLQSVKSCFVGRDGVRHLILCRVILGRTEIVQSDTKQCYPSCEDYDSGVDNISAPTKYMIWSSRMNTHVWPAYLISFKVSSSKGVEMNEDKHVKPTSPWMPFPILISVLSKVLPSLDIALICKFYKAKKEGKISRHELIQKVRQIAGDKLLISVIKSYRAKKKPASFQQTKSKNGI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02685 337 MobiDBLite consensus disorder prediction 1 47 - -
Trre5g02685 337 Gene3D - 47 240 - -
Trre5g02685 337 ProSiteProfiles RST domain profile. 254 325 IPR022003 -
Trre5g02685 337 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 22 321 IPR044964 -
Trre5g02685 337 Pfam RCD1-SRO-TAF4 (RST) plant domain 255 320 IPR022003 -
Trre5g02685 337 SUPERFAMILY ADP-ribosylation 50 250 - -
Trre5g02685 337 ProSiteProfiles PARP catalytic domain profile. 36 260 IPR012317 GO:0003950
Trre5g02685 337 MobiDBLite consensus disorder prediction 26 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02685 Trre-Chr5 21234770 21237474 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02685 - - gmx:100791977 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02685 5 21234770 21237474 Trre5g02685 5 21234770 21237474 ECH
Trre15g02865 15 24749363 24751648 Trre5g02685 5 21234770 21237474 PCT