Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02679 ATGGCAAATCAATCATCTGAGCTAGCCATTGAAAAACTGAAGAACCTTCTCAGAGAGAAGGAGGAACTTAATGAGGTTGTCACAACAAAAATTGAGGAGCTTATAGTTGAGTTGCAGGGAAGTCATCAACCTTATCCAATTGACACTGCTCAACAAAGAATCATTGATGGTTTTACTCACTTCAAGCTCAACAATTTCGACAAGAACCCGGAATTGCATGAACGACTTGCTAAGGGACCCTCCGCCAAGTTTATGGTATTTGCTTGCTCTGACCCTAGAGTGAGTCCCTCTACTATCTTGAACTTTCAACTTGGTGAAGCTTTCGTCGTCCGAAACATTGCTAATATGGTCCCTGCATTTAATCAGTTAAGATACAGTGGAGTTGGTGCAACAATTGAGTTTGCTATTGAAGTTCTAAAGGTTGAGAACATTTTGGTTATTGGACATGCTACCTGCGGCGGAATACCAAGGCTTATGAGTCATCCTGAGGATGGTTCTACTCCATATGACTTCATAGATGATTGGGTGAAAATTGGTTTAGCTGCAAAAATCAAGGTCCTGAGAGAACATGAAGGCCATGATTTCAAAGCACTATGCAAATTCTGTGAATTGGAATCAGTGAATAACTCATTGGTGAACCTGTATACATATCCAGGTGTTGATCGAGAAATAAAGAAAGGAAATTTAGCACTATTGGGGGGTTACTATGATCTTGTGAATGGAGAATTCAAGCTTTGGAAGTATAACTCTGTTGTTACTAAACCTATTACCATTCCCCTCAAAACCAATGACTTGACTATCTAA 804 0.398 MANQSSELAIEKLKNLLREKEELNEVVTTKIEELIVELQGSHQPYPIDTAQQRIIDGFTHFKLNNFDKNPELHERLAKGPSAKFMVFACSDPRVSPSTILNFQLGEAFVVRNIANMVPAFNQLRYSGVGATIEFAIEVLKVENILVIGHATCGGIPRLMSHPEDGSTPYDFIDDWVKIGLAAKIKVLREHEGHDFKALCKFCELESVNNSLVNLYTYPGVDREIKKGNLALLGGYYDLVNGEFKLWKYNSVVTKPITIPLKTNDLTI 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02679 267 PANTHER CARBONIC ANHYDRASE 32 249 IPR001765 GO:0004089|GO:0008270
Trre5g02679 267 Pfam Carbonic anhydrase 85 242 IPR001765 GO:0004089|GO:0008270
Trre5g02679 267 SUPERFAMILY beta-carbonic anhydrase, cab 51 249 IPR036874 GO:0004089|GO:0008270
Trre5g02679 267 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 133 153 IPR015892 GO:0004089|GO:0008270|GO:0015976
Trre5g02679 267 SMART Pro_CA_2 77 247 IPR001765 GO:0004089|GO:0008270
Trre5g02679 267 FunFam Carbonic anhydrase 47 254 - -
Trre5g02679 267 Gene3D Carbonic anhydrase 40 258 IPR036874 GO:0004089|GO:0008270
Trre5g02679 267 Coils Coil 3 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02679 Trre-Chr5 21170985 21172845 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02679 K01673 - gmx:547671 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02679 5 21170985 21172845 Trre5g02679 5 21170985 21172845 ECH