Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02646 ATGGGAAATTGCCAAGCAATTGATGCTGCAACACTAGTGATACAACATCCAAATGGGAAAACTGAGAAATTTTATTCATCTATAAATGCAAACCAAGTTATGAAAATGAATCCTGGTCATTGTGTTGCTCTTCTCATCTCCACCACAATCTATCCAAACAAGAACATTGAAAATTCTCCCAAAAATAATAATAGTGAAACGAAAACGAATCCCGTTCGATTAACTCGTATAAAGCTTCTTAAACCGACCGATGATCTTCTTCTTGGTCATGTTTATAGACTCATCACAACTCAAGAGGTTATGAAGGGTCTAAGGGAAAAGAAACAAGCAAAGATGAAACAGAACAAGTTAGAATCAGCTCATAAGCATGATTTGGTGAAGGAAAATTTGGAGTTAGAGATGGAGAAAAAATCAAGGAGGTTTGACACACAAGACAATCAGGCGACGAAACCCGAAAGAGGAAGAACAACTAGGACAACATCATCAACTAATAATGCTGCAAGTGTCACAGCTAAGACAAGATTCTGGCAACCATCTTTACAAAGTATCTCAGAGGTAGCCAGCTGA 567 0.3774 MGNCQAIDAATLVIQHPNGKTEKFYSSINANQVMKMNPGHCVALLISTTIYPNKNIENSPKNNNSETKTNPVRLTRIKLLKPTDDLLLGHVYRLITTQEVMKGLREKKQAKMKQNKLESAHKHDLVKENLELEMEKKSRRFDTQDNQATKPERGRTTRTTSSTNNAASVTAKTRFWQPSLQSISEVAS 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02646 188 Pfam PADRE domain 1 185 IPR025322 -
Trre5g02646 188 MobiDBLite consensus disorder prediction 107 152 - -
Trre5g02646 188 Coils Coil 127 147 - -
Trre5g02646 188 PANTHER EXPRESSED PROTEIN 1 187 - -
Trre5g02646 188 MobiDBLite consensus disorder prediction 107 174 - -
Trre5g02646 188 MobiDBLite consensus disorder prediction 153 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02646 Trre-Chr5 20766896 20768391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02646 - - gmx:100813476 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02646 5 20766896 20768391 Trre5g02646 5 20766896 20768391 ECH
Trre15g02809 15 24073576 24074863 Trre5g02646 5 20766896 20768391 PCT