Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02640 ATGGATTTATCATCTCTCATCTTCATCTTCTCACTCCTCATCTCTTCCTCCAAACCAACCCTATCTTCCACCCTTGGTGTTGACGCTATCTCTCGCACTCTTCAAATCCAACACCGAGAAAGATCACCGCCGTCTGTCCAAGAAGCTGCTGCTCGCTCCCTCCTCTCCCGCTTGCTCCCTTCTCATTCCTCTTCCTTCCATTTCCGGATCCTCTCCAAGAAGCAATGCGGAGGTGAATATTGTTTCACTATCAATAATCATCCTTCTTTTGCAACACAAGGGAGTCCTCAAATTCAAATTGAAGGGACGACAGGAGTTGACATTGTTGCTGGTTTGCACTGGTATTTGAAGCATTGGTGTGGTTCACATATATCTTGGGACAAAACTGGTGGCTCCCAACTATTTTCAGTACCTAATGTGGGGTTTCTGCCCCGTGTTCACGATGCTGGAATTTCAGTTCAGCGGCCTGTTCCATGGAACTATTACCAGAATGCTGTTACTTCTAGCTATTCTTTTGCTTGGTGGGACTGGAAAAGATGGGAAAAGGAAATTGACTGGATGGCATTGCAAGGTGTCAACTTGCCGCTTGCATTTACGGGACAGGAGGCTATCTGGCAGAAAGTGTTCAAGGAGAAATTTAACATGAGCATTTCTAATTTGAATGATTTCTTTGGAGGCCCAGCATTTCTTGCATGGTCACGCATGGGAAATTTACACGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATCAACAATTAATCTTACAGAAGAAAATTCTTGCCAGAATGTATGAGCTAGGGATGACTCCTGTCCTACCAGCTTTTTCTGGAAATGTCCCGGCTGCCCTGAAATCTATATTTCCATCAGCAAAAATAACACGCTTGGGAAATTGGTTTTCTGTTAAGAATGACCTCAAATGGTGCTGCACTTATCTTCTTGATGCAACTGATCCCTTGTTCGTTGAGATCGGGAGAGCATTTGTTGAACAGCAATTGGAAGAGTATGGAAGAACCAGCCACATATACAACTGCGATACCTTTGATGAGAACACCCCACCCATCGATGATCCAGAGTACATTTCTTCATTAGGTGCAGCAATCTTTAAAGGAATGCAGAGTGGTGATAATGATGCTGTTTGGTTGATGCAGGGATGGCTATTTTCATATGATCCGTTTTGGAGACCTCCTCAAATGAAGGCCCTTTTGCATTCTGTTCCTGTGGGAAAGCTGGTTGTTCTTGACTTGTTTGCCGAAGTAAAGCCCATATGGACTACCACAGAGCAGTTTTATGGTGTTCCTTACATCTGGAAAGTTGGAGTTGGAATGTCAATGGAAGGTATCGAACAGAATCCCATTGTATATGATCTGATGTCTGAAATGGCATTTCAGCACAAGAAAATTAATGTTAAGGTGTGGGTTGATTTGTATTCAACTAGACGATATGGAAGACAAGTTCCTTTGATACAAGAGGGATGGAATGTCTTGTATCATACCATTTACAATTGCACTGATGGAGCCTATGACAAAAACAGAGATGTCATTGTAGCATTCCCGGATGTAGACCCTTCCTTACTTTCAGTAGAGCACAAGCACTCTCGCCCCTATGGCAAGCCATTCTCGAGAACAATTATCAAGGAAATAACCGATTCATTTGATCGACCTCACTTATGGTATTCAACAGCAGAAGTAATTTATGCATTGGAACTATTTATATCTAGTGGAGATCAACTTTCAAAAAGTAGTACTTATAGGTATGACCTTGTCGATCTCACCAGACAAGTCTTAGCAAAATATGCAAATCAACTGTTTTATAACATCATTGAGGCATACCGATCACATGATGTTCATGAAGTGACCGTACTCAGCCAAAGATTTCTGGACCTGGTGGAAGATTTGGACTTATTGTTGGCTTGCCATGAAGGATTTCTTTTAGGCCCTTGGTTAGATAGTGCAATACAACTAGCTCAAAATGAAGAACAGAAAAAACAGTTTGAGTGGAATGCTAGAACTCAAATCACCATGTGGTTTGACAACACAGATGAAGAAGCCAGTCTGCTTCGTGACTATGGCAACAAGTACTGGAGCGGGCTTCTGCGTGATTATTATGGCCCCAGAGCTGCAATTTATTTTAAATATTTAAGAGAAAGTTTAGAAAAAGGTGTGGATTTCAATCTAAAGGAATGGAGGAGGGAGTGGATAAAACTTACCAATGATTGGCAAAGCCGTAGAAATATATTTCCAGTTGTAAGCAGAGGAGATGCTTTAAACACTGCTAGATGGCTTTTCAACAAATACCTCAACCTGACCAATCCTGAGACACTGGAGAGCTGGAGTGAACGTTTATCAGTGAAATTTCAATGA 2364 0.4217 MDLSSLIFIFSLLISSSKPTLSSTLGVDAISRTLQIQHRERSPPSVQEAAARSLLSRLLPSHSSSFHFRILSKKQCGGEYCFTINNHPSFATQGSPQIQIEGTTGVDIVAGLHWYLKHWCGSHISWDKTGGSQLFSVPNVGFLPRVHDAGISVQRPVPWNYYQNAVTSSYSFAWWDWKRWEKEIDWMALQGVNLPLAFTGQEAIWQKVFKEKFNMSISNLNDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPAFSGNVPAALKSIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDPLFVEIGRAFVEQQLEEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAAIFKGMQSGDNDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWTTTEQFYGVPYIWKVGVGMSMEGIEQNPIVYDLMSEMAFQHKKINVKVWVDLYSTRRYGRQVPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLLSVEHKHSRPYGKPFSRTIIKEITDSFDRPHLWYSTAEVIYALELFISSGDQLSKSSTYRYDLVDLTRQVLAKYANQLFYNIIEAYRSHDVHEVTVLSQRFLDLVEDLDLLLACHEGFLLGPWLDSAIQLAQNEEQKKQFEWNARTQITMWFDNTDEEASLLRDYGNKYWSGLLRDYYGPRAAIYFKYLRESLEKGVDFNLKEWRREWIKLTNDWQSRRNIFPVVSRGDALNTARWLFNKYLNLTNPETLESWSERLSVKFQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02640 787 Gene3D - 467 778 - -
Trre5g02640 787 Gene3D - 22 149 IPR029018 -
Trre5g02640 787 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 161 438 IPR024733 -
Trre5g02640 787 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 473 765 IPR024732 -
Trre5g02640 787 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 7 438 IPR007781 -
Trre5g02640 787 Gene3D Glycosidases 439 465 - -
Trre5g02640 787 Gene3D Glycosidases 156 438 - -
Trre5g02640 787 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 49 144 IPR024240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02640 Trre-Chr5 20692750 20701828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02640 K01205 - gmx:100791160 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02640 5 20692750 20701828 Trre5g02640 5 20692750 20701828 ECH