Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02630 ATGGCTGCATCAAAAATCATAGAGTTGAGTACAGACCGAATTGAGAAATCACTTGCTGCATCCTTGAAGGTTCACAAGACACCAGAGAAGTATTACCTTCTTGAAAAAAACAGCAGAAGCAACCCAAAAGAAGTTATCATCAGCTTTCCAGCATCAGGTGCTTTCAAAGATTGGTTTTCTGAAACTACCTTTGGTGAAACCGAAATAGATCTTAAACTATTTCCATCACTTAGAAGTATTGGTAACAATGAACCTGCTTTGGTTAATAAATTCTTTCTCCAAAGATTCCAAGACCTTTTGGAAAAGTCTTCACTTAAAATTGAGGTGGAAGATGCAATGAATAAGAAAAAGCAAATAGTTTTTGCAGGACACTCATCTGGTGGACCGGTGGCAATTCTGGCAACCCTTTGGACCATGGAACACTACCTAACTCCAAAATCTCAGGGTGGTATCCACCCCCTATGTATTACTTTTGGTTCTCCTTTAGTTGGAAATCACATATTTTCCCATGCTACAAGGAGAGAAGATTGGTCTAAATACTTCTTCCATTTTGTGTTGAGATATGACATAGTGCCAAGAATCCTCCTTGCCCCTCTATCTTCTTTTGACCAAAAGTTTGAGACAGTTTCACAGATCATAGATCCCAAAAACAAATCATTCATGAGTGAATCGAGTCTCAAAAGAATCGCTTCAATTTCAGATTTCTACTTTGAAGTGATGTCAAATGCTGTAACTGTTACTAGACATGCTGCTTGCAAGCTAATGGGAACAACAGAAGCAACACTTGAAACACTTGCAAATTTTATTCCTTTGAGTCCATACAGACCCTTTGGAACTTACATTTTCAGAACTACAAGTGGAAATGAAGGAAAGCAAATTGTCATGAAAAACCCTGATGCAATTCTGCAGGTCATGTTTTTTTCTGCTCAATTAAGCTCTGAAGAAGAAACTGATCAAGTTTCCTTTGAAAGCCTGCGACAACATTTAACTTATGGCATTGAACTGCAAAAAAACTTAGGATTACAGAATTTTGTGTACTTGGACCAACTAGAGAAGATTCCTTTGTCTGAGCATACTACTCCCGGCAGCGACATTTCAACCATTAACATAGCCTTAAATGATCTTGGACTGAGTACAAGAGCAAGACTATGCATTCAAGCAGCTGCAGCATTAGAGGAACGAAAAAGGACCAACGAAAAAAGCATAGAAGGGAAGAAAGCGTTTATGGAAGAAAAGATGAATGTACTGGCGAGTTACAGAGAAACGCGGGGGCATCAGAAAAAGGGTTACTACGATGCATTCAAGGATCAATTCGACCCCCAAGATTTCGATGCAAATGTGAAGAGGCTGGAACTTGCAGGAGTATGGGATGAGATAATCGAAAAGCTATTAAATGATGAACTACCAGCTGAATTTGAAGTGAATAAAGTATGGATTGATATAGGAACAAAGTTTAGAAGACTAGTCGAGCCTTTGGACATTGCTAATTACTATCGACATTTGAGGAACCGCGATGGACGTGCTTACATGGATAAAGGAGGAAGACCAAAACGTTACAGGTATACTCAAAGATGGTTGGAACATGCAGAGAGGAGGAGTGAAGAAGGTTACTCAGAATCTTGTTTTTGGGCTGAGGTGGAAGATCTTTCTAATAAGTCTTTTGAAAATGTTAAGGAAAAGGTTTTGGCATTGGAGGAAAAGATAAGGGACTGGAGTGAGAAAGGTGATGTTGGTAATGATGTGTTTTTGGAGGATTCTACATTTGTTAAGTGGTGGAAAACACTGCCACATAGGCAAGAATCATGCATTCAGCATCTTGTTAAAGTGTGA 1830 0.3902 MAASKIIELSTDRIEKSLAASLKVHKTPEKYYLLEKNSRSNPKEVIISFPASGAFKDWFSETTFGETEIDLKLFPSLRSIGNNEPALVNKFFLQRFQDLLEKSSLKIEVEDAMNKKKQIVFAGHSSGGPVAILATLWTMEHYLTPKSQGGIHPLCITFGSPLVGNHIFSHATRREDWSKYFFHFVLRYDIVPRILLAPLSSFDQKFETVSQIIDPKNKSFMSESSLKRIASISDFYFEVMSNAVTVTRHAACKLMGTTEATLETLANFIPLSPYRPFGTYIFRTTSGNEGKQIVMKNPDAILQVMFFSAQLSSEEETDQVSFESLRQHLTYGIELQKNLGLQNFVYLDQLEKIPLSEHTTPGSDISTINIALNDLGLSTRARLCIQAAAALEERKRTNEKSIEGKKAFMEEKMNVLASYRETRGHQKKGYYDAFKDQFDPQDFDANVKRLELAGVWDEIIEKLLNDELPAEFEVNKVWIDIGTKFRRLVEPLDIANYYRHLRNRDGRAYMDKGGRPKRYRYTQRWLEHAERRSEEGYSESCFWAEVEDLSNKSFENVKEKVLALEEKIRDWSEKGDVGNDVFLEDSTFVKWWKTLPHRQESCIQHLVKV 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02630 609 Pfam Enhanced disease susceptibility 1 protein EP domain 416 600 IPR041266 -
Trre5g02630 609 PANTHER PROTEIN EDS1-RELATED 4 608 IPR044214 GO:0006952
Trre5g02630 609 Coils Coil 554 574 - -
Trre5g02630 609 Gene3D alpha/beta hydrolase 14 240 IPR029058 -
Trre5g02630 609 Pfam Lipase (class 3) 47 194 IPR002921 GO:0006629
Trre5g02630 609 SUPERFAMILY alpha/beta-Hydrolases 40 198 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02630 Trre-Chr5 20623219 20625997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02630 112 195 Acyl Lipid Metabolism Gene Families AT3G07400 40.698 6.66e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02630 K18875 - gmx:100819703 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02630 5 20623219 20625997 Trre5g02630 5 20623219 20625997 ECH