Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02595 ATGGTTAGAGGTTTAGTTGGAGACAACATAGGATTGAATGAAGAAGTTATCAAAAAAACATGTAGTTTATCTTTCAAAGCTCACAAGTCACCAAATCAACCTTATATTTCTGAAAACTTTAAGACATCCTCAGAATCAACAGAATATCTTGTTATAAGCTTTCCTGGATCATGGGTTGAAACTGATTGGTTTGTTAGAAAACCTTTTGGTGAAACTAAGATAGATCTTGCTCAGTTTCCTTTGCTTAAAAGTGTTGGTAATGATGAAACTGCTTTGGTTAATGAAGCTTTTTTAAACAGATTCGATCGTTTGTTGAAATTTTCTTCAATTATATCCGAGGTGAACAAAGCTATGGCAGAAGGGAAGCAAGTAGTGTTTGCAGGTCACTCTTCAGGAGCTGTTTTGGCCATTCTTGCAACATTTTGGGCCTTGGAAGAGAATCTTAACTCAACCAAAACTCACCAAATTCAGCAAAAGTCACCTATGTGTGTGACTTTTGGTTCTCCCTTGATTGGTAATCATATATTCTCTCATGCTTCAAACCGAGAAAATTGGTCTCGTTACTTCATACACTTTGTCATGAGATATGATATAGTGCCAAGGATTTTTCTTGCTCCTTTTTCTTCTATTGAAAAACTTTTTAGTTCTGTTCTTCAGCTTTTAACTCCTAACAACAGCTCTGAACCTTCCTTCACTCAAGATTCGATAGAAGATAGTGTAACTTGTGAATTTTACTCTACTGTCATGAGAAATGTAGCGACTGTTACAAGCCATGTTGCTTGTAAGATAATGGGAAGCACAAATTTGTTGTTGGAGACTATGACAAATTTTGTTGAGTTAAGTCCTTATAGACCCTTTGGAACATACATCTTTTGCGACGGTAATGGACAGTTGATTGTGGTAAAAAACTCAGATGCGGTTTTACAACTCATGTTCCACATTGCTCAGCTAAGAGATTTGAAACAACTTTCTGAAGTTGCCAACAAAAGCATATTGCAACATCTAGCCTATGAAGCTGAATTAGAGGAGAGCTTGGGAATGCAAAATGTGGTATACTTAAACAAACTTGACAGCCTTCCCTTATCTGCTAACGATGGTCCTGATACCGACATTGCAGCTGCCTTGGATAGTCTTGGACTGAATGTAAGAGCACGGTTGTGCCTTCGAGCGGCTGGTGAGTTAGAAAAGAAAAAAGAAAGAAATGAGGAGAAAATAAAAAAGGAAATTGAAGAGAAGGCTTTGGCAAGCATCAGAGATTTGGAAGAATACAAAACAACATGTGAGATAAACAATGGAAAAGGTTATTATGATGCCTTCAAAGTGCAAAAAGAAGCAAAGGATTTCCAAGCAAATGTAAAGAGGCTTGTGCTTGCAGGAGTATGGGATGAGATCATTGAAATGCTTAAGAGGTATGAACTACCAGATGAGTTTGAAGGGAAAAGAGAATGGATTGTACTCGGAACCAAGTTTCGTCGTCTTGTTGAGCCTCTAGATATTGCCAATTATCATCGGCATTTGAAGAATGAGGACACGGGACCTTACATGAACAAGGCTAGGCCAAAGAGGTATAGGTATACTCAAAGATGGTTGGAGCATGCAAATAGGTTGCCAAAAGAAGAAATCACAGAATCGACTTTTTGGGCTGAGGTGGAGGAACTTTGCAGCTGGATTAGTAATAATAAACCTTTTGAAGATGTTAAGGAAAGGGTTCTTAAACTTGAGCAAGATATTAAAAAGTGGACTGATAAAGAGGAACTAACCAAGGATGTGTTCTTAAAGGATCCTACTTTCATAAAGTTATGGGAAAGTCTACCTCATGAACACAAATCTACATCCTGCATCTCCACTCTCTTTACTTTTAAAGGATAG 1869 0.3767 MVRGLVGDNIGLNEEVIKKTCSLSFKAHKSPNQPYISENFKTSSESTEYLVISFPGSWVETDWFVRKPFGETKIDLAQFPLLKSVGNDETALVNEAFLNRFDRLLKFSSIISEVNKAMAEGKQVVFAGHSSGAVLAILATFWALEENLNSTKTHQIQQKSPMCVTFGSPLIGNHIFSHASNRENWSRYFIHFVMRYDIVPRIFLAPFSSIEKLFSSVLQLLTPNNSSEPSFTQDSIEDSVTCEFYSTVMRNVATVTSHVACKIMGSTNLLLETMTNFVELSPYRPFGTYIFCDGNGQLIVVKNSDAVLQLMFHIAQLRDLKQLSEVANKSILQHLAYEAELEESLGMQNVVYLNKLDSLPLSANDGPDTDIAAALDSLGLNVRARLCLRAAGELEKKKERNEEKIKKEIEEKALASIRDLEEYKTTCEINNGKGYYDAFKVQKEAKDFQANVKRLVLAGVWDEIIEMLKRYELPDEFEGKREWIVLGTKFRRLVEPLDIANYHRHLKNEDTGPYMNKARPKRYRYTQRWLEHANRLPKEEITESTFWAEVEELCSWISNNKPFEDVKERVLKLEQDIKKWTDKEELTKDVFLKDPTFIKLWESLPHEHKSTSCISTLFTFKG 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02595 622 Gene3D alpha/beta hydrolase 8 332 IPR029058 -
Trre5g02595 622 PANTHER PROTEIN EDS1-RELATED 7 618 IPR044214 GO:0006952
Trre5g02595 622 Coils Coil 391 411 - -
Trre5g02595 622 Pfam Lipase (class 3) 52 204 IPR002921 GO:0006629
Trre5g02595 622 Pfam Enhanced disease susceptibility 1 protein EP domain 419 616 IPR041266 -
Trre5g02595 622 SUPERFAMILY alpha/beta-Hydrolases 43 240 IPR029058 -
Trre5g02595 622 Coils Coil 563 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02595 Trre-Chr5 20351625 20354615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02595 79 216 Acyl Lipid Metabolism Gene Families AT5G14930 30.216 1.67e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02595 K18875 - gmx:100778851 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02595 5 20351625 20354615 Trre5g02595 5 20351625 20354615 ECH