Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02421 ATGTGGCACTTCAACAAAATACACTTAAATCTAGTTGCATTTTCTATCACTACCTTTGTGGTGTTTTTTTATATTGATTCATTAGATGGTGTTAAATTAGTGTCTAGATTGAATTATCAAAGGGTTCAAAAGGGAGATTTAGGATCCGCCACCCTTTCATCTTACAAGGATGAGGGAAGACATGAGCCAATAGTCTCTAATGGATTGGTTAACAATTTGCCTATAAGAAGATCAATGCAAGGAGATGGAAATTTGGAGAAAGTTGAAGCAAGTCTTGCAAAAGCAAGAGAATTGATAAAACAAGCCTTGTTGAGAACCAATGACATTGTGTCTCTTGAGGATTCTCATGATTATATTCCACAAGGAGACATCTACAGAAATGCTTTTGCTTTTCATAGAAGTTACCACTTAATGGAAAAGCTCTTTAAAATCTTTGTGTATGAAGAGGGAGAACCTCCTCTTTTTCATTATGGTCCTTGCAAGAATATATATTCAATGGAAGGAATATTTATCAATTCATTGGAAAGCAATACTCTATTTCGGACTCAAAATCCAAATGAAGCTCATGTCTACTTTCTTCCATTTAGTGTTGTTATGATCCTTGAACATCTCTTTCATCCAATTATTCGTGACAAAGCTGTTTTGGGGAGAACTATTGGTGATTATGTTCATATCATATCACACAAATATGCATATTGGAATAGAAGTTATGGAGCTGACCATTTCATGCTTTCTTGTCATGATTGGGGACCAAGGTCAACATGGTATGTTAAGGAATTATATTTTATTGCAATCCGAGTACTTTGCAATGCAAACATCTCTGAGCATTTCAATCCAAAGAAAGATGCATCATTTCCTGAAATCAACTTAGTAACAGGAGAAACAAAAAATCTACTTGGTGGTTATCCATCATGGAACAGAACAATTTTGGCTTTCTTTGCAGGAGGAATGCATGGTAGAATTAGACCAATACTTTTTCAACATTGGAAAAACAAAGACAAAGATGTGTTAGTTTATGAAAAGCTTCCAAAAAATGTTTCATACCATGAAACAATGAAGATGAGTAAATATTGTATTTGTCCAAGTGGGTGGGAAGTGGCAAGTCCAAGAATTGTTGAGGCAATTTATGCTGAATGTGTACCTATTATAATATCACAACAATATGTGCTTCCTTTTAATGATGTTCTTAATTGGGATTCTTTCTCTGTTCAAATTGAAGTGAGTGAAATTCCTAAGCTTAAGGAAATTTTGTTGGGTATATCTGAGGAGAAATATATGAGATTGTATGAGGGAGTTAAGCAAGTGCAAAGACATTTTGTTGTGAATAATCCTCCTAAGAAATATGATGTATTCCATATGATTATTCATTCCATATGGCTTAGGAGATTGAATGTAATTGTGAAATGA 1407 0.3404 MWHFNKIHLNLVAFSITTFVVFFYIDSLDGVKLVSRLNYQRVQKGDLGSATLSSYKDEGRHEPIVSNGLVNNLPIRRSMQGDGNLEKVEASLAKARELIKQALLRTNDIVSLEDSHDYIPQGDIYRNAFAFHRSYHLMEKLFKIFVYEEGEPPLFHYGPCKNIYSMEGIFINSLESNTLFRTQNPNEAHVYFLPFSVVMILEHLFHPIIRDKAVLGRTIGDYVHIISHKYAYWNRSYGADHFMLSCHDWGPRSTWYVKELYFIAIRVLCNANISEHFNPKKDASFPEINLVTGETKNLLGGYPSWNRTILAFFAGGMHGRIRPILFQHWKNKDKDVLVYEKLPKNVSYHETMKMSKYCICPSGWEVASPRIVEAIYAECVPIIISQQYVLPFNDVLNWDSFSVQIEVSEIPKLKEILLGISEEKYMRLYEGVKQVQRHFVVNNPPKKYDVFHMIIHSIWLRRLNVIVK 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02421 468 Coils Coil 85 105 - -
Trre5g02421 468 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 111 458 IPR004263 GO:0006486|GO:0016757
Trre5g02421 468 Pfam Exostosin family 139 417 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02421 Trre-Chr5 18679670 18684091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02421 - - gmx:100787227 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02421 5 18679670 18684091 Trre5g02421 5 18679670 18684091 ECH