Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02371 ATGGCGAAGGAAGAAGGAACCCACACCGTCGTTTCCGATCTCATCAACTTTCTCAACGCATCTCCAACTGCTTTCCACGCCGTCGACGAAGCCAAGAGGCAGTTGAAAACCGCAGGGTACCATCAAATCTCGGAGAAGGAAAATTGGGAACTCAAACCCGGCCACAAATATTTCTTCACCAGAAACCATTCCACAATCGTCGCTTTCGCTATCGGCAAAAGATTTGTTGCCGGAAATGGATTCTACATAGTTGGTGCTCACACTGATAGTCCTTGTCTGAAACTGAAGCCGGTGTCGAAGGTGGTTAAGGGTGGAATATTGGAGGTTGGTGTTCAAACCTATGGAGGAGGTTTATGGCACACATGGTTTGATCGTGATTTGACGGTGGCTGGAAGGGTTATATTACGAAAAGAAATTGCAGGTTCTGTTTCTTACTTGCATCGCCTTGTTAGAATTGAGGAACCTATAATGCGTGTCCCAACTTTGGCAATTCACTTAGACAGAGGTGTTAACGATGGATTCAAAGTAAACACTCAGACTCATCTTCTTCCCATCCTTGCAACATCTCTAAAGGCAGAGGCTAATAAAGTTTCCTCTGAAAGCAATTCAGTTGAAAGTGGAAGCAAAGAAAATGATAAAACAGGCTCTAGCAATGCGAAGCACCACCCTATACTTTTACAGTTGCTTGCACGTAAGCTTGAGTGTGAACCAGATGAAATTTGTGATTTTGAATTGCAAGCTTGTGATACACAACCAAGCATAGTTGCTGGAGCCGCCAAGGAGTTCGTATTTTCGGGACGGCTTGATAACCTCTGCATGTCATTTTGTTCTTTGAAGGCATTAATAGATGCTACATCCTCTGACAGCAGTCTTGAGGAAGAGCCTGGCATTAGAATGGTGGCGTTGTTTGACCATGAGGAATGTGGGTCTAACTCTGCTCAAGGAGCTGGCTCTCCTGTAGTGCTAGATGCCATGTCTAGGATTACAGAGTTCTTCAGCCCAAATTCGAAGCTTCTCGAGAAAGCAGTACAAAGAAGCTTTCTTGTATCTGCTGATATGGCACATGCACTACACCCAAATTACATGGACAAGCATGAAGACAACCATCAACCTAAACTACATGGAGGACTTGTCATTAAGCAAAATGCAAACCAACGCTATGCAACCAATGCTGTCACATCCTTCATTTTTAGGGAGATAGCAACCAAACATAATCTTCCCGTTCAGGACTTTGTGGTGCGCAATGACATGGGATGTGGTTCAACAATAGGTCCTATCCTTGCGAGTGGCATTGGTATTCGAACTGTTGATGTTGGAGCACCGCAGTTGTCAATGCATAGCATCCGAGAAATGTGCGCTGTTGATGATGTGAAGTATTCATATGAGCATTTCAAGGCCTTTTTTCAGGAATTCTTTCATCTAGATGCTAATTTAGTTGTGGACATATAA 1449 0.4382 MAKEEGTHTVVSDLINFLNASPTAFHAVDEAKRQLKTAGYHQISEKENWELKPGHKYFFTRNHSTIVAFAIGKRFVAGNGFYIVGAHTDSPCLKLKPVSKVVKGGILEVGVQTYGGGLWHTWFDRDLTVAGRVILRKEIAGSVSYLHRLVRIEEPIMRVPTLAIHLDRGVNDGFKVNTQTHLLPILATSLKAEANKVSSESNSVESGSKENDKTGSSNAKHHPILLQLLARKLECEPDEICDFELQACDTQPSIVAGAAKEFVFSGRLDNLCMSFCSLKALIDATSSDSSLEEEPGIRMVALFDHEECGSNSAQGAGSPVVLDAMSRITEFFSPNSKLLEKAVQRSFLVSADMAHALHPNYMDKHEDNHQPKLHGGLVIKQNANQRYATNAVTSFIFREIATKHNLPVQDFVVRNDMGCGSTIGPILASGIGIRTVDVGAPQLSMHSIREMCAVDDVKYSYEHFKAFFQEFFHLDANLVVDI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02371 482 FunFam Aspartyl aminopeptidase 1 92 252 - -
Trre5g02371 482 Gene3D Zn peptidases 14 467 - -
Trre5g02371 482 SUPERFAMILY Zn-dependent exopeptidases 8 469 - -
Trre5g02371 482 CDD M18_DAP 13 469 - -
Trre5g02371 482 Gene3D Aminopeptidase i, Domain 2 91 251 IPR023358 GO:0004177
Trre5g02371 482 PANTHER ASPARTYL AMINOPEPTIDASE 4 481 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 153 170 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 81 97 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 114 134 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 435 450 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 303 321 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 346 362 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 Pfam Aminopeptidase I zinc metalloprotease (M18) 17 468 IPR001948 GO:0004177|GO:0006508|GO:0008270
Trre5g02371 482 SUPERFAMILY Aminopeptidase/glucanase lid domain 93 246 - -
Trre5g02371 482 MobiDBLite consensus disorder prediction 197 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02371 Trre-Chr5 18176405 18181467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02371 K01267 - gmx:100781379 818.15