Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02366 ATGGTAGCTGCTGATTCTCGTGCTAGCATGGGAGGATATATATCATCACAATCTGTGAAGAAAATTATTGAAATCAATCCTTACATGCTTGGAACAATGGCTGGTGGTGCTGCTGATTGCCAATTCTGGCATAGGAATCTTGGCATCAAGTGTCGCTTGCATGAGTTGGCAAATAAAAGAAGAATTTCAGTAACAGGAGCCTCCAAGTTACTTGCAAATATTTTATACTCATACCGTGGAATGGGGTTATCTGTTGGTACCATGATTGCTGGATGGGATGAGACGGGTCCTGGTCTATATTATGTTGACAGTGAAGGAGGAAGACTTAAAGGCACCAGATTCTCTGTAGGATCTGGTTCACCATATGCTTATGGTGTATTGGACAGCGGGTACAAATATGACATGTCAATTGAGGAAGCTTCTGAATTAGCTCGACGAGCAATTTATCATGCCACATTTCGTGATGGTGCTAGTGGTGGAGTTGCTAGCGTTTACTACGTGGGACCAACTGGATGGAAGAAATTGTCTGGTGATGATGTTGGTGAACTTCACTATCATTACAATCCAGTTACCCCAACCATCGTAGAGCAAGAAATGGTTGAGGCTGCTGCACCTTGA 618 0.432 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELHYHYNPVTPTIVEQEMVEAAAP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02366 205 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 193 IPR029055 -
Trre5g02366 205 CDD proteasome_beta_type_5 1 176 - -
Trre5g02366 205 FunFam Proteasome subunit beta 1 198 - -
Trre5g02366 205 ProSiteProfiles Proteasome beta-type subunit profile. 1 167 IPR023333 -
Trre5g02366 205 PRINTS Proteasome component signature 117 128 IPR000243 GO:0004298|GO:0005839|GO:0051603
Trre5g02366 205 PRINTS Proteasome component signature 153 164 IPR000243 GO:0004298|GO:0005839|GO:0051603
Trre5g02366 205 PRINTS Proteasome component signature 128 139 IPR000243 GO:0004298|GO:0005839|GO:0051603
Trre5g02366 205 PANTHER METALLOPROTEASE TLDD 2 175 IPR023333 -
Trre5g02366 205 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 187 IPR029055 -
Trre5g02366 205 Pfam Proteasome subunit 2 167 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02366 Trre-Chr5 18101844 18105017 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02366 K02737 - gmx:100778498 400.979