Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02354 ATGGACCATAAATTTGCTTACATGTGGGTGGGTAATTCGGAGTTACAGTGTCCCGGTCAATGTGCGTGGCCTTTTCACCAATCTATTTATGGGCCTCATAGCCCACCGTTAGTTGCCCCCAAAAATGATGTTGGTCGTGATGGAATGGTGATTAACATCGCCAGTTTATTGGCTGGGACCGTGACAAATCCATTTGGAAATGGATTCTTTCAAGGTCCCAAAGAAGCGCCTTTAGAAGTTTGCTCAACTTGTACTGGTGTGTATATATGGTACAAGGGCTTATTCTGGAATCATAGATGTGTCTTCTTCTGTACCAAACTTTACCACCTTCCTCTTCTTATCTCTTCTTTCCCCGCTGCATGTGCCGTTTTTTCCGCTTCTTTCTTCCATAATTCACCTCCACTCTCTCTGCCTCTGATTTGA 423 0.4421 MDHKFAYMWVGNSELQCPGQCAWPFHQSIYGPHSPPLVAPKNDVGRDGMVINIASLLAGTVTNPFGNGFFQGPKEAPLEVCSTCTGVYIWYKGLFWNHRCVFFCTKLYHLPLLISSFPAACAVFSASFFHNSPPLSLPLI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02354 140 PANTHER PROTEIN EXORDIUM-LIKE 5 3 89 IPR006766 -
Trre5g02354 140 Pfam Phosphate-induced protein 1 conserved region 3 88 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02354 Trre-Chr5 18026124 18030369 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02354 - - atri:130811242 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02354 5 18026124 18030369 Trre5g02354 5 18026124 18030369 ECH
Trre9g03015 9 38427825 38428766 Trre5g02354 5 18026124 18030369 PCT