Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02349 ATGGCATTTTGTTCATTCTTCATTTCGAAAACCCTAAAAAACCATAACCATTATTACTTCACTGCCAAATTTTCCACTTCATTTCTAGTCACCAAAACCCCAAAAAAACACAAGAAAAAACAAAAACCCAAATCAAGTCCAAGAACAAACCCAATCCAAACTCAACCAAATCGGGTAACCGAATTCGAACGCATCGTAGAACGCGAAACCCTAATGAAATTCGTCACAAGATCAAAAAACTATCTCTGTAACCAACCGGAACACGTTCTTCAACTCGACGACGCCGGTAAACTCCACCGCGAACTCGGTTTCCCACGCGGCCGGAAAATTGCAAAATCAATCCAACGTCATCCGTTACTCTTCCAAACCTACCGTCACTCCGACGGCAAAATGTGGCTCGGATTTACCGATCTAATGGAAGAATTAATCGCGGAAGAACTATCGATTATGGAATCAATGGAACTCGATCGTGTCGATAAGGTTCGTAAGCTTCTCATGATGTCGAGATTTCACCGTATTTCATTAGCTAAAATTCATCATTGTAGAAATTTATTTGGTATACCGGATGATTTTCGTGATCGGGTTGTTAAATACCCGAATTACTTCCGCGTTGTTGTTGATAACAACAACGACGATGGGAAGAGTGTTCGGGTTCTTGAGTTGGTTAAATGGGATCCAATTTTAGCTGTGAGTGCGATTGAAAGAGAGTTTATGGTGAATGAAGAAGCTGCTAAGAGGAAATTTAATTTTCCTGTGAAACATGGGAAGGATTTGGATTTGGAATTTGACGATGAAAAGAAGCTGAATTTGTTAAATGCGCTTCCGTTGGTGTCGCCTTATTCAGACGGTTCGAAATTGGATGTGTGGACTTTGGAAGCTGAGAAATATAGAGTTGGTTTGATTCATGAGTTTTTGAGTTTGACATTGGAGAAGAGAGCTTCAATTCATCACCTTGTTGAGTTTAAGGAGGAGTTTAGTTTAACTAAGCATACTTATCATATGTTACTTAAGCAGCCGAGGGCGTTTTATTTGGCTGGAACTGAGATGAATTGGGTTGTGTTTTTGAAAGATGGTTATGATCAAAATGGTGTTTTGATTCAGAAGGATCCTCAGGTGTTGTTTAATGAGAAGCTTTATAAGTATGCTCAGATACAGGAAATGGAACCTGGTTCTGATGTTGGATTGGAAAATCAACTTATGGATTAA 1206 0.3939 MAFCSFFISKTLKNHNHYYFTAKFSTSFLVTKTPKKHKKKQKPKSSPRTNPIQTQPNRVTEFERIVERETLMKFVTRSKNYLCNQPEHVLQLDDAGKLHRELGFPRGRKIAKSIQRHPLLFQTYRHSDGKMWLGFTDLMEELIAEELSIMESMELDRVDKVRKLLMMSRFHRISLAKIHHCRNLFGIPDDFRDRVVKYPNYFRVVVDNNNDDGKSVRVLELVKWDPILAVSAIEREFMVNEEAAKRKFNFPVKHGKDLDLEFDDEKKLNLLNALPLVSPYSDGSKLDVWTLEAEKYRVGLIHEFLSLTLEKRASIHHLVEFKEEFSLTKHTYHMLLKQPRAFYLAGTEMNWVVFLKDGYDQNGVLIQKDPQVLFNEKLYKYAQIQEMEPGSDVGLENQLMD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02349 401 MobiDBLite consensus disorder prediction 31 57 - -
Trre5g02349 401 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 38 385 IPR045040 GO:0003723
Trre5g02349 401 Pfam Plant organelle RNA recognition domain 58 384 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02349 Trre-Chr5 17977919 17979124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02349 - - gmx:100813429 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02349 5 17977919 17979124 Trre5g02349 5 17977919 17979124 ECH