Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02316 ATGATTGGCATAGCGGTTACCAGCATCTACACGCTCACACCAACACTCTCTTCATTCACGCGCCCCACGCGCCCCACGCGCCCCACGCGCTTCTTCTCACCTACTGCTAAGTTTCCACTTCGTCTTCGAGCTTCTTCTTCTTCAACGATATTTGTTGAGACTAATCCAACAGATTCCGTCGTAGTTGAGAAGGAAGTTAATCGGAGCAGCAATCCTTTGGCTTGTCCTGTATGTTATAACTCATTGACATTGATCACTGGTCGTGCGTTGTCCATAGATACTATTCCTCAATCTAGTTTACAATGTAGCACCTGTCAGAAAACATATATTGGTAGCCAAACACATCTTGATCTCACGACAATAAGCGGTGCTAAGAACTATGGTGAACCCATGCCAGCTTCCACTGAGCTTTTCAGGATGCCGTTGGTATCATTTCTCTATGAGAGGGGCTGGCGTCAAACCTTTTCTGTATGGGGTGGTTTTCCAGGTCCTGAGAAAGAGTTTGAACTAATGAAGGGTTTCCTGAAACCAGTATTGGGTGGAAATATCATCGATGCTAGTTGTGGAAGTGGATTATTTTCAAGATTATTTGCAAAAAGTGGACTTTTTTCTTTGGTTGTGGCTCTAGACTACTCAGAGAACATGCTGAGGCAATGTTATGATTTCGTTCAGCAGGAAGAAAACTTTCCAAAAGAGAACTTCGTCTTGGTTAGAGCAGACATAGCTAGACTTCCTTTTGTTTCTAGTTCTGTTGATGCTGTGCATGCAGGAGCAGCTATTCACTGTTGGCCTTCACCATCAGCAGCTGTAGCTGAGATAAGTCGCGTTTTACGACCTGGAGGTGTCTTTGTTGCAACCACCTACATACTGGATGGGCCTTTTAGAGCTGTCCCATTTTTAAATACATTGCGCCAGACTATAAGGCAAGTATCTGGGATCTATACCGTTCTCTCTGAACGTGAACTTGAAGCTCTCTGCAAGACGTGCGGGCTGGTTGGATTTAAATGCATTAGAAATGGGCTTTTTGTGATGATTTCTGCCTCAAAGCCTAAGTAA 1056 0.4432 MIGIAVTSIYTLTPTLSSFTRPTRPTRPTRFFSPTAKFPLRLRASSSSTIFVETNPTDSVVVEKEVNRSSNPLACPVCYNSLTLITGRALSIDTIPQSSLQCSTCQKTYIGSQTHLDLTTISGAKNYGEPMPASTELFRMPLVSFLYERGWRQTFSVWGGFPGPEKEFELMKGFLKPVLGGNIIDASCGSGLFSRLFAKSGLFSLVVALDYSENMLRQCYDFVQQEENFPKENFVLVRADIARLPFVSSSVDAVHAGAAIHCWPSPSAAVAEISRVLRPGGVFVATTYILDGPFRAVPFLNTLRQTIRQVSGIYTVLSERELEALCKTCGLVGFKCIRNGLFVMISASKPK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02316 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 338 IPR029063 -
Trre5g02316 351 PANTHER METHYLTRANSFERASE 95 334 - -
Trre5g02316 351 FunFam Putative methyltransferase, chloroplastic 138 349 - -
Trre5g02316 351 CDD AdoMet_MTases 182 290 - -
Trre5g02316 351 Gene3D Vaccinia Virus protein VP39 138 349 IPR029063 -
Trre5g02316 351 Pfam Methyltransferase domain 185 284 IPR013216 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02316 Trre-Chr5 17716559 17720894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02316 - - mtr:25489434 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02316 5 17716559 17720894 Trre5g02316 5 17716559 17720894 ECH