Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02297 ATGGCTTCAAGAGTAGCTTTGTTGATGTTTTTGTGTGTTCTTCCAGCTATGGTTTCAGCTATTCGTCCAGCAAAGAATCCTTTCTGTTTGAAGGGTCATGTTGTATGTGATCTTTGCCGTGCTGGTTATGAAACTTCTGCTATCACTCACATTGCTGGTGCTGATGTTCTCTTGGAATGCAAAAAAAGGGTTGGCGCCGAGGTTGTGTACACAAAGGCAGCAAAGACCGACTCAACCGGAGAATATACAATCTATGTGAATGAGGATCATGCAGATGAGGTCTGTGATGTGAAGCTAGTACACAGTCCTCAGGATAGTTGTAACGAATTCGTACCAGGACGTGACCAAGCACGTGTTATTCTCACCGGCTACAACGGCATTGCCTCTAATGATAGGTTTGCCAATGCCATGCTATTCAAGGCAAATGAAGTTGCTTCTGGCTGTGCTGAGATCCTCAAGCAAATGCAGGAGTTGGATGAAGAGAATTAA 489 0.4438 MASRVALLMFLCVLPAMVSAIRPAKNPFCLKGHVVCDLCRAGYETSAITHIAGADVLLECKKRVGAEVVYTKAAKTDSTGEYTIYVNEDHADEVCDVKLVHSPQDSCNEFVPGRDQARVILTGYNGIASNDRFANAMLFKANEVASGCAEILKQMQELDEEN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02297 162 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 7 157 IPR006041 -
Trre5g02297 162 Pfam Pollen protein Ole e 1 like 31 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02297 Trre-Chr5 17418641 17419962 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02297 - - gmx:100305566 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02297 5 17418641 17419962 Trre5g02297 5 17418641 17419962 ECH