Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02296 ATGTTAGGAAAAAGACCACGTCCTCCAATGAAAAGAACAACAAGTTTGTCAGAAATAACCTTCGATCTGAACACAGTAATTACTGCAGAGGATGATCCCAACAACAACAACAACAACAACCTTCATGGTCCTGCAGGTGTTGGTCCTTTTGGTCTATATCCACCAACTTCACCTGGAATCAACGGTTCAGATCAAACCAGAGTTTTGTCCTCAGTTTCACCTAGAAACCATAGAAGAAATTCCTCTGACATGACTCACCCTGATTTCTTGCGCTCTTGCTTTCTCTGTAAACGCCGTTTGGTCCCTGGCCGTGACATCTATATGTACAAGGGAGATAGTGCTTTTTGCAGTCTAGAGTGTCGTCAACAACAGATGAATCAAGATGAGAGGAAGGATAAGTGTTGTGTGGTATCATCAAAGAAAAAACTTGTGGTTGCAACTGGGTCTCAAGTTGCAACAAATTTGTAA 468 0.4188 MLGKRPRPPMKRTTSLSEITFDLNTVITAEDDPNNNNNNNLHGPAGVGPFGLYPPTSPGINGSDQTRVLSSVSPRNHRRNSSDMTHPDFLRSCFLCKRRLVPGRDIYMYKGDSAFCSLECRQQQMNQDERKDKCCVVSSKKKLVVATGSQVATNL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02296 155 MobiDBLite consensus disorder prediction 28 43 - -
Trre5g02296 155 ProSiteProfiles Zinc finger FLZ-type profile. 88 132 IPR007650 -
Trre5g02296 155 MobiDBLite consensus disorder prediction 28 84 - -
Trre5g02296 155 Pfam zinc-finger of the FCS-type, C2-C2 80 131 IPR007650 -
Trre5g02296 155 PANTHER FCS-LIKE ZINC FINGER 5 1 141 - -
Trre5g02296 155 MobiDBLite consensus disorder prediction 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02296 Trre-Chr5 17389408 17390251 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02296 - - psat:127084181 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02296 5 17389408 17390251 Trre5g02296 5 17389408 17390251 ECH