Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02279 ATGGGAGTACAGGGTACTTTGGAATACTTGTCTGATTTACTCAGTAGCACCAAAAAGAAGAAAAAGAAACAAACTCAAACTGTTGCTCTTAAAATAAGAATGGATTGTGAAGGATGTGCTCGCAAGGTTAAACATGTCCTTTCTGGTGTTAAAGGAGCTAAGAAAGTGGATGTGGACTTAAAGCAGCAGAAAGTAACAGTGAGTGGATATGTTGAACCAAAGAAAGTATTGAAGGCTGCTCAATCAACAAAGAAGAAGGTTGAACTTTGGCCTTATGTTCCATACAATATGGTGGCTCATCCATATGTTTCTCAAGCTTATGATAAGAAGGCACCTCCTAATATGGTTAGAAAGGTGGCTGACACTTCCAACATAAAAGAGACCACATTTGATGATAGCTATGTTGAAATGTTTAGTGATGAAAATCCAAATGCATGTTCTATTATGTAA 450 0.3711 MGVQGTLEYLSDLLSSTKKKKKKQTQTVALKIRMDCEGCARKVKHVLSGVKGAKKVDVDLKQQKVTVSGYVEPKKVLKAAQSTKKKVELWPYVPYNMVAHPYVSQAYDKKAPPNMVRKVADTSNIKETTFDDSYVEMFSDENPNACSIM 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02279 149 ProSiteProfiles Heavy-metal-associated domain profile. 25 88 IPR006121 GO:0046872
Trre5g02279 149 Gene3D - 12 91 - -
Trre5g02279 149 Pfam Heavy-metal-associated domain 32 85 IPR006121 GO:0046872
Trre5g02279 149 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 27 147 IPR045181 GO:0046872
Trre5g02279 149 SUPERFAMILY HMA, heavy metal-associated domain 25 91 IPR036163 GO:0046872
Trre5g02279 149 CDD HMA 34 88 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02279 Trre-Chr5 17264019 17264825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02279 - - gmx:100782955 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02279 5 17264019 17264825 Trre5g02279 5 17264019 17264825 ECH