Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02274 ATGTCTAGAGTTACTAAGTGGAAGATTGAGAAAACAAAAGTAAAGGTGGTTTTTCGCCTCCAATTCCATGCTACACATATTCCACAATCTGGATGGGATAAACTATTTATTTCTTTCATCCCTGCTGACTCTGGGAAGGTTACATCAAAAACAACCAAAGCGAATGTGAGAAATGGAACTTGCAAGTGGTCAGATCCAATCTATGAAACTACAAGATTGCTCCAAGACATTAAAACAAGACAATTTGACGAGAAAGTTTACAAACTTGTTGTGGGGATGGGTTCTTCACGATCTAGCATCCTTGGTGAGGCCAACATAGACCTGGCTGATTTTGTTGATGCATTGAAGCCTACAGCTATCGCTTTGCCTCTTAATGGATGTGAGCCTGGAGTTACACTACATGTCGCAGTGCAGCTTCTCACTTCAAAAACCGGTTTCAGAGAATTTGAACAGCAGAGGGAACTCAGAGAGAAGGGTCTACAGACAACATCTGACCAAGGTAGTCATGATGAATCTGCTGATAGCAAAGAGTCATCTCCTGATCAGAATGTCAATAATCACATTAATAAGGTTAATTCAAGATTGAAATTGAAAAGGGAATCAAAATATCTCCCTCGTACTTCTTCACTCGAAGGAGAATCAAGGTTAAATGAAGAGTATGCTGACTCAGCTGGTGGATTTGATGGCTCTTCTACTACTTCTGAAAGTGTATATACTGAAAAGCATGATATCTGCAGCATAGACTATTCAGCTGCAAATAATTTGGCTGCTGCTTCCGAAGACTGTAGCAGTAGCAGTCATATGGGAAATTTAGAAGCAGTTGAGTCATCTATTCTTGATCTAAAATTGAAGGTGAACTGTTTGCAAAATGATTCTGATGAAATAGGTGTTGAAACAAAACATTTTTCTGAGCAAATTGCTGCCGAGATATCATCAGGAGAAGCACTAGCAAAAGAGGTCGCTGTACTAAAATCAGAATGTTCAAAGTTTAAAGATGAATTTGAGCAGCTTAAAAGTTCTAAGTTAAGCTTAGCATTTGCTCGCAATGAGCCTACAGAGACAGATAGGGATAAATTATTCAATAACTTACAGCTTAAATGGCATAAAGGGCTTTTGCTCATGGAAGATAAGTTAAGAGATATTCAGAAGGTGTCAATGGGATTTCCTGAAAGGGATTTTAGGTTCTTTAACTTGGAGTTGGAAAGAGTGGTTGATATATTGCAGGATCTCAAACAAGAATCTGGAGATCCAATTCCAGGGACTAAAGTTGCCAATGGAAGAGAGACCAAGAAAATGGACTTACATATGGGTGATCCACTTTTAACAGATATTGGGTCTGATGTAGCTTTATTTCAACCTGAAAGCATGACTCAGTATCTTACCATACCTGGCCTTGTGTCTCATGAGTTTAATTCTGTAGATCCCACCCTTGCTATGAAGGAGAAAATTTTCGAACTTCTAAGGGAGCTAGACGAGTCCAAAACTGAAAGGGAAGGCTTTGTGCGAAAAATGGACCAGATGGAGTGCTACTATGAAGCTCTTATTCAGGAACTTGAGCAAAATCAGAGGCAGATGATGGCCGAGTTGCAGAACCTCAGGAATGAACATTCTACTTGCCTATATGCAATTTCCGCCGGTAAGACTGAGATGGAGAAAATGCACCAAAGTATGAATGAGCAGATAATGAAATTTTCTGAAGATAAGCGCATTTTGGAATCTCTCAACAGTGAGTTTGAAAGAAGGGCTATTTCTGCAGAAGCAGCCCTTAAAAGAGCTAGATTGAACTATTCTATTGCTGTCGGTCAATTGCAAAAAGATCTCGAACTTCTTTCTTGCCAGGTTCTTTCTATGCATGAGACAAATGAGAATCTCATAAGCCAGACCCTTTCCGATTCTTCACTTTCAAACACCGATGGTGTCCCGGAGCCAGTGAATTATACTAAAAAATCAGAAGGTCATGCTTCTAATCAATTGCTACGTCAAAATCACAGTTCTTCCTTTCAAAGACAACATTTGGGTGAAGATGTTTTACTAAGCGAATTGAAAAGGTCACTCCAATTGCAAGAGGGGTTATACAGACAAGTTGAAGAAGAAATCGGCCAAATGCATTTTGTAAATATATACTCAGATGTGTTTTCTAAGGCTCTGCAAGAAACATTGTTTGAAGCCAGCCTTAACATTCAGGACATGAAAGATGAAAATTTTCAACTCTCTAGGCAGCTGGAGCTTACAAATCAATCCAACGAGTTACTAGTGCAGAGATTGCAGAATGCTACGAATGATATCCTCTCATTAAAGGAGTACCAGGAGATTTGCATAGCAAAGAGCAATGATCTTACTCAACAGAACCAAAGGTTAGAGGAAAATTTAAAAGATCTTGGTCATGAGAACAATCTTCTTACTCATAAAATTAATGAGTTGGAAGTTCTTCTGACAGATTACAGAAGCTATAAAAGCAAATTTGTTGCGTGCAGTGCAGAAAACTCAGAATTGAAGGGCTTATTGAAAAAAGAGAGCCTAGAAAATGGAAATCTTCATGATGAGATATCTATTTTGAAGGAAGAGTTAAAATCTTTCAGAACTAACTTTGATGAGCTGGATTCCATGAAGAATGATCTGCAAAATAAAGTGGTCTTTTTGTCTAATAAGTTGCAGAAATTGGTGGCATCATATGATGATAGAGGCACTGAACTTTCTCTTTGTTCTGCTTGTTTGGATTCAGAATGTGAAGACTTAGAAGGTCTGTTATTGGGACTAGAAGAGCAGCAACGTAATGCTTTTGATAGGATCCTGGTACTCATTGAAGAGAAGAAAAATCTAGTGAGGGAAAAACATATGGTTCAAGTATCTTTAAACACAGCAGAATCAGACGCTCTAGTCATGAAACAGAAGTTTGAGTGTGATTTACAGCAGATGGTAAGTGACATAAGTGTGTCTGGTATCCAGTTGCAGAAACTTGAATCAAATCTTGAGGTGTTTGTTGACAGGATCAGTGCTGGCCTTAAATCTGAAGAAATATACTCGCAGCAGCACAATGAATTGGTTTCCAGTCTTGATCATTTGGAAGCTGAACTTCGGCAACTTAATTCCAGAAATCAAGATCTTACTCAAGAAATTATAAAGCTAGGTACTCTATCTAGTGACCTTGAAATGTGTAAGCTGACCTTAGCAACAATTACAGAGGAGAAGAAAGCTTTGGAGTTGTCTTTACAGGAAAAAACAGAAGAATCTGCCAATATTTCAACAGAGATTAACTTTTTGAAGAACAATTTGTGTTCTCTGCACAACGAGAAGAAAGCTTTGGAGTTTTCTTTACAGGACAAAACAGAAGAATATGCTAAGACTTCATCGGAGATTAGTTTTTTGAAAAACAACTTGTCTTCACTGCACAATGAGAAGAAAGCTTTGGAGTTGTCTTTACAGGAAAAAACAGAAGAATCTGCTAAGACTTCATCAGAGATTAATTTTTTGAAAAACAACTTGTCGTCACTGCACAATGAGAAGAAAGCTTTGGAGTTGTCTTTACAGGAAAAAACAGAAGAATCAGCCAAGATTTCATCCGAGATTAATTTTTTGAAAAACAGCTTGTTTTCTCTGAACAATGAGTTGCATGATGAAAAAGTCGTCAGAGAAAAATTGGAGAAAACAGTTACTGATCTTACCACAGAATTGAATGAAAGGCAACACCAGCTGCAGGATTCTGATATGAACAGACAAGAACTGGTCCATCTCAAGCAAGTGGTCACAGACTTGGAATTTGAGAAATCAAAATTATCAGATCTTCTACAGATATCTGAGAAACGTCTTGAAGACGCTTTAAAGGAATCTTCTTCTATTAGCTGTCTGGAAACTCACTTATCCGAAATGCATGAATTTTCAACAGCTACGGATGTTGTTACGACCTTTACCAGAGCTCAATTCGAAGGTCATGTAGAGGAACTTACTGAAAAACTTCATTCTGCTTGCAGACAAGTGGATGTGCTTTGTGAGAAGAATCTTGATTTGGAATCTGAATTGAATGTCTGTCTTTGTAGAGAATTGAATTGCATGGAAGAAAATATAACGTTGTCGACGAGTCTTGACTACCTAAAGTCTGAGTTAGCAGTCTATACTGCTCAGTGTAGAGCACTAATCGATCAAAATAGTGTAACAATATCAGAGCTTAAGGAACACAAGAGCAAGACAGAAAATGTCAGCAATTCTTCTTATTCACGTGACATCGAGTGTCAGCTTGAGGTTGTAAGGCTGGAGAAAATGCTGGAAATTGTTAGTAGAGATGGGGAAGGACTGCTTTTATCAAATGTAGAAGCTGAAGTCAAATGTATAGTTCTCCAAGGAAAATTGAATGAACTTGAAACTGCAATTACTTCATTGAAACAATCAGATAATGAGCTGATAAGGCTGCAGAACCAATGTAATGAGCTTACCAGGAGGCTTTCTGAACAGGTTCTTAAAACTGAGGAGTTCAAGAATTTGTCTATTCATTTGAAGGAGCTGAAAGACAAAGCTGAAACTGAGTGCCTTAATGCCCGTGACAAAAGAGGACACGAAGGACCACCGGCTGCTATGCAAGAGTCATTGAGAATTGCGTTTATCAAGGAACAATATGAAACTAAGTTGCAAGAACTGAAACAGCAACTGTCTTTGTCAAAAAAGCATAGTGAGGAAATGCTGTGGAAACTACAAAGTGCGAGTGAAGAAACTGAGAATAGAAAAAAGTCCGAAGCTGCTCAAATAAAAATAAATGAAGAGCTGGGAATGAAGATCTTGGAATTGGAGGCTGAGTTACAGGCTGTAATTTCTGACAAACGCAATTTGTTAAATGCTTATGACCTGTTAAAGGCTGAAAAGGAGTGCTCCGTGATATCCCTTGAATGCTGTAAGCAAGAAAAGCAAGAGGTTGAAGCTTCTCTTCTGAAATGCAGCGAGGAAAAGTCCAAAATTGATGCGGAGCTTACCCTAGTGAAGGAATCACTTGAGACTTTGAAATCTAATGTGAATGTTTTGAATGAGGGCAATGGCACACCGTCTTCACTAAATCCTCAAGAACAATCAGTCCCTGTTGCTTGCAGTCGTGAACCAGAGAGTGCAAATTCAATCCCCAATATGCAACCAGAGGATTCTCTTGCATTTAGAGTTACAAATGGAGGCCAAACTCTAGGAACTGAAGAGGATTTACAACAAAATGAAGAAAAAAAGCATCTGGCTTTAGCTGAAAGTTTGAAATCTAGCATCGATCACCTGAATAAGGAGTTGGAAAGGATGAAAAATGATAATATGCTTCCAACAGAAGATGGTCAAAACCATGAGGCACGTTTTCCTAGTCTGCAAAGAGAACTGACACAGTTACATGAGGCCAATCAAGAGTTAGGAAACATGTTCCCTGTGTTCAATAAAATCTCTGTCAGTGGTAACGCATTAGAGAGAGTTCTTGCTTTGGAAATTGAGCTTGCTGAAACATTGCAAGCCAAGAAGAAGTCAAGTATCCAATTTCAGAGCTCCTTCTCAAAACAACACAACGATGAAGAAGCGATATTCAGAAGTTTCAGGGATATCAATGAGCTAATTAAAGATATGCTAGAATTAAAGACGAGACATTCTTCCATGGAGACAGAGCTAAAAGAGATGCATGACCGTTACTCTCAACTAAGTCTTCAGTTTGCAGAAGTTGAAGGCGAGAGACAAAAACTCATAATGACACTTAAGAATACTCGAGCATCCAAGAAGGCTCCAAATTCTTCAACCTACTTCAGAGACCATTCCTTATCGCCGCACTAG 5778 0.3856 MSRVTKWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADSGKVTSKTTKANVRNGTCKWSDPIYETTRLLQDIKTRQFDEKVYKLVVGMGSSRSSILGEANIDLADFVDALKPTAIALPLNGCEPGVTLHVAVQLLTSKTGFREFEQQRELREKGLQTTSDQGSHDESADSKESSPDQNVNNHINKVNSRLKLKRESKYLPRTSSLEGESRLNEEYADSAGGFDGSSTTSESVYTEKHDICSIDYSAANNLAAASEDCSSSSHMGNLEAVESSILDLKLKVNCLQNDSDEIGVETKHFSEQIAAEISSGEALAKEVAVLKSECSKFKDEFEQLKSSKLSLAFARNEPTETDRDKLFNNLQLKWHKGLLLMEDKLRDIQKVSMGFPERDFRFFNLELERVVDILQDLKQESGDPIPGTKVANGRETKKMDLHMGDPLLTDIGSDVALFQPESMTQYLTIPGLVSHEFNSVDPTLAMKEKIFELLRELDESKTEREGFVRKMDQMECYYEALIQELEQNQRQMMAELQNLRNEHSTCLYAISAGKTEMEKMHQSMNEQIMKFSEDKRILESLNSEFERRAISAEAALKRARLNYSIAVGQLQKDLELLSCQVLSMHETNENLISQTLSDSSLSNTDGVPEPVNYTKKSEGHASNQLLRQNHSSSFQRQHLGEDVLLSELKRSLQLQEGLYRQVEEEIGQMHFVNIYSDVFSKALQETLFEASLNIQDMKDENFQLSRQLELTNQSNELLVQRLQNATNDILSLKEYQEICIAKSNDLTQQNQRLEENLKDLGHENNLLTHKINELEVLLTDYRSYKSKFVACSAENSELKGLLKKESLENGNLHDEISILKEELKSFRTNFDELDSMKNDLQNKVVFLSNKLQKLVASYDDRGTELSLCSACLDSECEDLEGLLLGLEEQQRNAFDRILVLIEEKKNLVREKHMVQVSLNTAESDALVMKQKFECDLQQMVSDISVSGIQLQKLESNLEVFVDRISAGLKSEEIYSQQHNELVSSLDHLEAELRQLNSRNQDLTQEIIKLGTLSSDLEMCKLTLATITEEKKALELSLQEKTEESANISTEINFLKNNLCSLHNEKKALEFSLQDKTEEYAKTSSEISFLKNNLSSLHNEKKALELSLQEKTEESAKTSSEINFLKNNLSSLHNEKKALELSLQEKTEESAKISSEINFLKNSLFSLNNELHDEKVVREKLEKTVTDLTTELNERQHQLQDSDMNRQELVHLKQVVTDLEFEKSKLSDLLQISEKRLEDALKESSSISCLETHLSEMHEFSTATDVVTTFTRAQFEGHVEELTEKLHSACRQVDVLCEKNLDLESELNVCLCRELNCMEENITLSTSLDYLKSELAVYTAQCRALIDQNSVTISELKEHKSKTENVSNSSYSRDIECQLEVVRLEKMLEIVSRDGEGLLLSNVEAEVKCIVLQGKLNELETAITSLKQSDNELIRLQNQCNELTRRLSEQVLKTEEFKNLSIHLKELKDKAETECLNARDKRGHEGPPAAMQESLRIAFIKEQYETKLQELKQQLSLSKKHSEEMLWKLQSASEETENRKKSEAAQIKINEELGMKILELEAELQAVISDKRNLLNAYDLLKAEKECSVISLECCKQEKQEVEASLLKCSEEKSKIDAELTLVKESLETLKSNVNVLNEGNGTPSSLNPQEQSVPVACSREPESANSIPNMQPEDSLAFRVTNGGQTLGTEEDLQQNEEKKHLALAESLKSSIDHLNKELERMKNDNMLPTEDGQNHEARFPSLQRELTQLHEANQELGNMFPVFNKISVSGNALERVLALEIELAETLQAKKKSSIQFQSSFSKQHNDEEAIFRSFRDINELIKDMLELKTRHSSMETELKEMHDRYSQLSLQFAEVEGERQKLIMTLKNTRASKKAPNSSTYFRDHSLSPH 1925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02274 1925 Coils Coil 1738 1758 - -
Trre5g02274 1925 MobiDBLite consensus disorder prediction 158 177 - -
Trre5g02274 1925 Coils Coil 776 803 - -
Trre5g02274 1925 Coils Coil 713 733 - -
Trre5g02274 1925 Coils Coil 1533 1553 - -
Trre5g02274 1925 Coils Coil 271 291 - -
Trre5g02274 1925 Coils Coil 1624 1644 - -
Trre5g02274 1925 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 140 IPR019448 -
Trre5g02274 1925 Coils Coil 1451 1485 - -
Trre5g02274 1925 Coils Coil 1852 1879 - -
Trre5g02274 1925 Coils Coil 678 698 - -
Trre5g02274 1925 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 946 - -
Trre5g02274 1925 Coils Coil 1582 1609 - -
Trre5g02274 1925 Coils Coil 835 890 - -
Trre5g02274 1925 MobiDBLite consensus disorder prediction 158 191 - -
Trre5g02274 1925 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Trre5g02274 1925 Coils Coil 1311 1331 - -
Trre5g02274 1925 Coils Coil 1255 1275 - -
Trre5g02274 1925 Coils Coil 741 761 - -
Trre5g02274 1925 Coils Coil 1105 1195 - -
Trre5g02274 1925 MobiDBLite consensus disorder prediction 1904 1925 - -
Trre5g02274 1925 Coils Coil 1210 1230 - -
Trre5g02274 1925 Coils Coil 504 535 - -
Trre5g02274 1925 Coils Coil 1011 1045 - -
Trre5g02274 1925 Gene3D - 1102 1188 - -
Trre5g02274 1925 Coils Coil 1056 1090 - -
Trre5g02274 1925 Coils Coil 575 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02274 Trre-Chr5 17213063 17222138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02274 - - cam:101511009 2961.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02274 5 17213063 17222138 Trre5g02274 5 17213063 17222138 ECH