Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02267 ATGAGTAATCTTAGAACCCTATGCAAACCTCACACAGTGTTCTCTTTTATCAATTGCAGACATCAATTTCGATTCAGAGCTTCGTTTTCTAACCCTAATTGTAAACCCAGTTTGCAATTGCAATCGCAATCGCCTTGGTTTTATTCTACATGGCTCGTTTCTTCGGATTCGAGCAGAACCATGCCTCGGTTTCGATTGAATCAGAAAAAAACTGTTGCGAAAGCAACAAATTGGGATCAACCTAAGTCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGATGAACAGATAAAGATTTCTTATCGACGTTTGGCCAAATTTTATCATCCAGATGTCTATAATGGAAGAGGAACACTTGAGGAAGGTGAAACGGCGGAAGCTAGGTTTATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGCAGATAGGCGAAAACTGTATGACATGGATAATCGGGTCAATCCTATGAAGGCATCTCAAGCATGGATGGATTGGCTTATGAAAAAGCGAAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAGCGCGATTTGAATGTTCGCGTGCGTCAACTTTCTCGTTCAAAGATTGATCCAGATGAAGAAAGGAAGATTCTGGCTAGAGAAAAGAAGGCTTCAGCTGCACATTTCAGCAGTACCCTTAAAAGGCACACACTTATACTGAAGAAGAGAGATCTAATGCGAAAAAAAGCTGAAGAAGAAATGAAGAAGACTATCAGCCAGCTCTTAGCCGCAGAAGGTCTCGAGCTTGCTGATAGCGACGAGGAATTATAG 825 0.417 MSNLRTLCKPHTVFSFINCRHQFRFRASFSNPNCKPSLQLQSQSPWFYSTWLVSSDSSRTMPRFRLNQKKTVAKATNWDQPKSPYETLELEGDADDEQIKISYRRLAKFYHPDVYNGRGTLEEGETAEARFIKIQAAYELLIDADRRKLYDMDNRVNPMKASQAWMDWLMKKRKAFDQRGDMAIAAWAEQQQRDLNVRVRQLSRSKIDPDEERKILAREKKASAAHFSSTLKRHTLILKKRDLMRKKAEEEMKKTISQLLAAEGLELADSDEEL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02267 274 ProSitePatterns Nt-dnaJ domain signature. 131 150 IPR018253 -
Trre5g02267 274 Pfam DnaJ domain 84 151 IPR001623 -
Trre5g02267 274 CDD DnaJ 84 143 IPR001623 -
Trre5g02267 274 SUPERFAMILY Chaperone J-domain 78 152 IPR036869 -
Trre5g02267 274 Gene3D DnaJ domain 68 170 IPR036869 -
Trre5g02267 274 PRINTS DnaJ domain signature 103 118 IPR001623 -
Trre5g02267 274 PRINTS DnaJ domain signature 85 103 IPR001623 -
Trre5g02267 274 PRINTS DnaJ domain signature 172 191 IPR001623 -
Trre5g02267 274 PRINTS DnaJ domain signature 126 146 IPR001623 -
Trre5g02267 274 ProSiteProfiles dnaJ domain profile. 83 154 IPR001623 -
Trre5g02267 274 SMART dnaj_3 82 146 IPR001623 -
Trre5g02267 274 PANTHER CO-CHAPERONE PROTEIN DJLA 60 264 - -
Trre5g02267 274 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02267 Trre-Chr5 17169944 17172487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02267 - - gmx:100808285 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02267 5 17169944 17172487 Trre5g02267 5 17169944 17172487 ECH