Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02266 ATGGATGCCTCAAACAAACATGAAGATGCGGGGAAAACCCTTGAAGCACAAGCGAAAGCCTTTTTTGACTCTGCTCCACCTTTGCACAACAGTCATAAAATATCTCAAGATTTGAATAATTTCATTCAACAAAATTCTTCATCATTAGAAAATGGAGAAGGTAGGAGAATTGTTTGTGTGACTTCTGGTGGTACCACTGCTCCATTGGAGCAAAGGTGCGTCCGATATGTTGATAATTTCAGTTCCGGTCATCGAGGGGCTACGTCTACCGAATACTTTCTGAAGGCTGGATATGCTGTTATCTTTTTGCACCGTAGGGGAAGTTTCCAGCCATTTTGCAGATCCCTTCCTGATGATCCCTTACTTGAATGCTTCGAGCCGACCAACGACTTAAATATTCAAGTTCGCGAGGCTTATTCTGAAGCAGTGAAAAGGGCTTATTTGTATCATCATACTGCAGTGGCAGGCTGTCTCTTGTTAAAACTTCCTTTCAGCACCATATTTGAGTATCTTCAGATGCTGCATATGATTGCAATGTCAATGAGGTGTATTGGTCGACGTGCAATGTTTTATCTTGCTGCTGCAGTATCTGACTATTATGTTCCTTGGAAGGATATGGTGGAGCACAAAATTCAGTCAGGATCTCACCTCTTGGATGTGAAACTTGTTCAAGTGCCAAAGATGTTGTCAGTGCTTAGGAAAGACTGGGCTCCTCAGGCATTCTGCATATCTTTCAAGTTAGAGACAGATTCAAGCATTCTTTTAAATAAGGCGAATGCGGCTCTTGAAAAGTACAATATGCATGCAGTTGTTGCAAATGAACTGTTAACACGCAAGGAGCAAGTGGTTGTTGTCACTAGTGCCGAAAAGATTACCGTTCTGCGAGACAATAGTGAGTCTGCTAATGATGTAGAGGATCCTCTGATTAAACTTCTTTCAGAGAGACATACCACTTACATTGAGGATTCTAGTAGGTGA 978 0.4182 MDASNKHEDAGKTLEAQAKAFFDSAPPLHNSHKISQDLNNFIQQNSSSLENGEGRRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRGATSTEYFLKAGYAVIFLHRRGSFQPFCRSLPDDPLLECFEPTNDLNIQVREAYSEAVKRAYLYHHTAVAGCLLLKLPFSTIFEYLQMLHMIAMSMRCIGRRAMFYLAAAVSDYYVPWKDMVEHKIQSGSHLLDVKLVQVPKMLSVLRKDWAPQAFCISFKLETDSSILLNKANAALEKYNMHAVVANELLTRKEQVVVVTSAEKITVLRDNSESANDVEDPLIKLLSERHTTYIEDSSR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02266 325 Pfam DNA / pantothenate metabolism flavoprotein 165 280 IPR007085 -
Trre5g02266 325 SUPERFAMILY CoaB-like 51 319 IPR035929 -
Trre5g02266 325 Gene3D - 34 324 IPR035929 -
Trre5g02266 325 PANTHER CORNICHON-RELATED 49 290 - -
Trre5g02266 325 FunFam Phosphopantothenate--cysteine ligase 2 34 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02266 Trre-Chr5 17167225 17169484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02266 K01922 - gmx:100808811 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02266 5 17167225 17169484 Trre5g02266 5 17167225 17169484 ECH