Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02265 ATGGAAGAAGGTTCCGAATACATCGACATCAACCTTTCTCCGGTGAAGCTCCCACCCAAACTTCCTCAAGATCCGCCGCTCAAATCTAACCGCCGTCTCCGCCGACGAGGTGACACTTGGGTCATATCTGTGTTGGTAATATTCCAAATAGGATTTTTCATAGCAACGATGCTCGTCAATGATTGCTTCACCAATTCTCACGGTGATTGCACTTTTCCATCTCTCGGAAGGTTATCGTTTCAGCCTCTATCTGAAAATCCTTTGTTAGGTCCTTCCATGTCAAAGTTGGATGAAATGGGAGCTCTTAGAAAGAACTTTTTAACGGAGCATCATCAAACATGGCGTCTTTTCACGTTTCCATTTTTGCACGCTGGACTCTTCCATGTTGTTATCAATCTCTGCAGTATCATCTATGTTGGAATTCACCTAGAGCAGCAGTTTGGTCCATTAAGGATTGGTATAATCTATATACTATCTGCTTTTATGGGGTCCTTATTGGCTTCTCTCTTTCTTCAAAATATTCCTGCTGTTGGTTCTTCTGGTGCTTTATATGGATTACTAGGAACATTGCTTGCAGAACTTGTTTGGCACTGGAAATTTCATAACAATAAGATTTCAGAAATAGCTTCATTAGTCTTTGTCTTTGTGTGCAACTTCTTCCTTGGTTTTCTGCCTTATGTAGACAATTTTTCAAACATTGGAGGTTTTATATCAGGATTCCTTCTTGGAACTGTTCTATTATTCGCCCCTCAGTTCCAACAAGTAGCTCCAAGTAAAGGAGATCCAATTGATTACAGTCTCAAAAGTTACATAAAATTGAAGCTCAAGCAAAAGCTAACCAGACCAGTTACTAGGATTGTTTCTCTTATCCTCTTCACCCTGATATTGGCTGGTTGTCTTGTTGCAGTTCTTTATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTTGACTGTATCCCTTTCGCAAGCTGGCACTGCAAAGACAGAGAAACCTTTTGTGAGACAATGGTGAGTAATGCTCACTTGACGATGACATGTTTGGGGACTGGCAACTTTAAGGTCTTTCATTACACCAACATATCTCGAGCAAGGATTAATGATTTGTGCAATTTAATATGTTGA 1131 0.4023 MEEGSEYIDINLSPVKLPPKLPQDPPLKSNRRLRRRGDTWVISVLVIFQIGFFIATMLVNDCFTNSHGDCTFPSLGRLSFQPLSENPLLGPSMSKLDEMGALRKNFLTEHHQTWRLFTFPFLHAGLFHVVINLCSIIYVGIHLEQQFGPLRIGIIYILSAFMGSLLASLFLQNIPAVGSSGALYGLLGTLLAELVWHWKFHNNKISEIASLVFVFVCNFFLGFLPYVDNFSNIGGFISGFLLGTVLLFAPQFQQVAPSKGDPIDYSLKSYIKLKLKQKLTRPVTRIVSLILFTLILAGCLVAVLYGININSYCTWCPYVDCIPFASWHCKDRETFCETMVSNAHLTMTCLGTGNFKVFHYTNISRARINDLCNLIC 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02265 376 PANTHER RHOMBOID-RELATED 24 329 IPR002610 GO:0004252|GO:0006508|GO:0016020
Trre5g02265 376 Pfam Rhomboid family 109 247 IPR022764 GO:0004252|GO:0016020
Trre5g02265 376 Gene3D - 34 249 IPR035952 -
Trre5g02265 376 SUPERFAMILY Rhomboid-like 37 251 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02265 Trre-Chr5 17161135 17164327 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02265 - - gmx:100793747 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02265 5 17161135 17164327 Trre5g02265 5 17161135 17164327 ECH