Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02257 ATGAAGACTCGTCCCTCTACCAAAATCTCTGCAAAATGGATTCCAATTTTCTCTGTCTTTTCCTTCATTATTGGCATGTTAATCACAAACAGGATGTGGGAGCAACCTGAATCTAATGGTGTGATAATTTCTAAACATCAGCGTGATCAACAAGAACTTCAAGTGATCTCAGAGGACTGTGATACCAAAAAGAAGCAGGAAAAGCCTAATGATGAAATGAATGAATTGTATAAAACTCATCAAGCTATTCAGGCACTTGACAAGCAAGTTTCCATGTTGCAAATGGAATTAGCAGCAGCTAGGAATTCTCGCGAAACCAACTCAAGTGGCTCAGCCACCACTTCCGGTGAAGGTGCTTCCAAGAAGAAGAAGGCATTTATAGTGATAGGTATAAACACAGCTTTCAGTAGTAGGAAACGTCGTGATTCAGTTAGAGAAACTTGGATGCCTCAAGGTGAACAACTTCTTCAATTGGAAAGGGAGAAAGGAATTGTTATCAGATTCATGATCGGGCACAGTGCAACTTCCAACAGCATTCTAGATCGTGCTATTGATTCAGAAGAAGCTCAACACAAAGACTTCCTTCGCCTGCAACATGTTGAAGGATATCATGAGCTGTCTGCCAAGACAAAGATTTTCTTTTCTACCGCAGTTGCATTATGGGATGCTGATTTCTATGTCAAAGTAGATGACGATGTTCATGTCAATTTAGGTGTCCTGGCTGCAACCCTTGCCCGTCATCGATCGAAACCAAGAGTATACATTGGGTGTATGAAATCGGGACCTGTTCTATCTAGAAAGGATGTCAAGTACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAAGGAAACAAATACTTCCGACACGCAACTGGGCAGATATATGCAATCTCGAAGGCTTTGGCCACTTACATTTCCATTAACCAGCCGATTTTACATAAATATGCTAATGAAGACGTCTCACTTGGTGCATGGTTCATCGGTCTTGAAGTTGAGCATATTGATGACCGCAGTATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCACAAGCTGGTAACATTTGTGTTGCGTCATTCGATTGGAGCTGCAGTGGAATCTGCAAATCAGTGGAGAAGATTAAATATGTGCATTCAAAATGTGGTGAAGGGGATGGAGCCGTTTGGAGTGCTCTATTTTAG 1185 0.4203 MKTRPSTKISAKWIPIFSVFSFIIGMLITNRMWEQPESNGVIISKHQRDQQELQVISEDCDTKKKQEKPNDEMNELYKTHQAIQALDKQVSMLQMELAAARNSRETNSSGSATTSGEGASKKKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKIFFSTAVALWDADFYVKVDDDVHVNLGVLAATLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKALATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02257 394 Coils Coil 83 103 - -
Trre5g02257 394 MobiDBLite consensus disorder prediction 100 118 - -
Trre5g02257 394 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre5g02257 394 MobiDBLite consensus disorder prediction 99 118 - -
Trre5g02257 394 Pfam Galactosyltransferase 139 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre5g02257 394 FunFam Hexosyltransferase 119 340 - -
Trre5g02257 394 Gene3D - 116 340 - -
Trre5g02257 394 Pfam Domain of unknown function (DUF4094) 10 102 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02257 Trre-Chr5 17087031 17090223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02257 1 394 Glycosyltransferase AT1G77810 69.949 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02257 K20855 - gmx:100776715 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02257 5 17087031 17090223 Trre5g02257 5 17087031 17090223 ECH