Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02207 ATGTCCACTGGTAATCACACTCAAACTCATCATCCTTTACAGGTTGCAAAGCGATTAGAGAACCTCAAACCAACAATCTTCACTCAAATGAACCCTGATAAGGAAATTACTGTTACAGCTGGTTGCACAGAAGCAATTGCTGCAACTGTATTAGGATTAATAAATCCTGGTGATGAGGTTATTCTGTTTGCTCCATTTTATGATTCTTATAGTGCCACTTTATCGATGGCTGGTGCGAATATAAAAAGCATTACTCTGCGCCCTCCTGATTTTGCTGTCCCAATTGAAGAGTTGAAGTCCATCATCTCAAAGAATACTCGTGCGATTCTTATAAATACACCTCACAATCCTACCGGAAAGATATTCACTCGAGAAGAGCTTAACACTATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACCGACGAAGTTTATGATAAGTTGGCATTTGATATGGAACACATTTCAATTGCTTCTTTGCCTGGAATGTTCGACCGGACGGTAACAATGAACTCGTTAGGGAAGTCATTCTCCTTAACAGGATGGAAGGTTGGATGGGCCATAGCACCTCCACACTTAACATGGAGATTGCGACAGGCACACACTTTCATCAATTTCTCAACTGCAAATCCTTTTCAGTGTGGTGCTGTAGCAGCACTTTGA 669 0.4096 MSTGNHTQTHHPLQVAKRLENLKPTIFTQMNPDKEITVTAGCTEAIAATVLGLINPGDEVILFAPFYDSYSATLSMAGANIKSITLRPPDFAVPIEELKSIISKNTRAILINTPHNPTGKIFTREELNTIASLCIENDVLVFTDEVYDKLAFDMEHISIASLPGMFDRTVTMNSLGKSFSLTGWKVGWAIAPPHLTWRLRQAHTFINFSTANPFQCGAVAAL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02207 222 PANTHER FI04487P 22 222 - -
Trre5g02207 222 SUPERFAMILY PLP-dependent transferases 29 222 IPR015424 -
Trre5g02207 222 Pfam Aminotransferase class I and II 25 216 IPR004839 GO:0009058|GO:0030170
Trre5g02207 222 Gene3D - 28 222 IPR015421 GO:0003824
Trre5g02207 222 FunFam Aspartate aminotransferase 13 222 - -
Trre5g02207 222 CDD AAT_like 32 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02207 Trre-Chr5 16616274 16618582 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02207 K23977 - gmx:100818968 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02207 5 16616274 16618582 Trre5g02207 5 16616274 16618582 ECH