Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02199 ATGGAAACAATAACAACAACAACAACTCAGAAGAAGAGTCAATCAAAGCTAACAAGAACACAATCCTCTCTTCTCAATCTCACTTCTTCACCAACACTTCGATCATCTTTTCAAAGCCTAACTTCAATCAACGATTACTACGACGAAGAAGACGACAAAAATAACAAGAAGAAAATCAAGAAACCTCAAAACCGAACCGGGTCGACCCGAATAACAACACCGGTTATCGCTGTTATTTCATTCGGTTTCCTCGGCGCGTGTTCGTTTTTCTTCTACTTCTCCTTCCTCGGGAGTGACGAGGTACCTACCTCAGAGAATCTCTTACTCGCTTTGATTTTCATCGCCGTTGCTCTTTACTTCGCTTCGAAGAACAAACGCTTAATCAACCACGGAATTTCCGTTTTCAAGCAGTGGTGGGAAATTAACGTGAAACGGGTCGGGTTCGGTTTCGGGTTATCAAAATCATCAGAATCGAAACCGGTTCAATGGTTCATCGGCGATTCAACAACAACAACAACAACAACAACGAAGAAAAAGAGTGTTAGAGAAGGTGTTGAGTTTTACAGTAATGGTGATTTTTACGAAGGGGAATTTCATAAAGGAAGAAGTAATGGGAGTGGTGTTTACAATTACTTTGTGAATGGAAGATATGAAGGTGATTGGATTGATGGAAGATATGATGGTTATGGAATTGAGAGTTGGGCTAGAGGGAGTCGTTATAAAGGTCAATATAGAAAAGGAATGAGACATGGTTATGGTGTTTATAGATTCTATACTGGTGATTCTTTTTCTGGTGAATGGTGTAATGGTCAAAGTCATGGTATGGGTCTTCAAACTTGTTCTGATGCTAGCACTTATGTTGGTCAGTTTAAGCTTGGTGTTAAACATGGTCTTGGTTGTTACCATTTTAGAAATGGAGATAGATATGCAGGGGAGTATTTTGGAGACAAAATTCATGGATTTGGAGTCTACCATTTTGCTAATGGACATTGTTATGAAGGAGCGTGGCATGAGGGTCGTAGACAAGGTATTGGCTCATATACTTTTCGAAATGGTGATCGAAGATGTGGCGAATGGGATGCTGGTAACCTCAAGCATCCTCTGCCACCACAAACTGATGTTGTGATTCGAGCGATTCAGGCTGCTAGGAAAACGGCTGAGAACGCGATAAACCTTAAACGGGTCGAAGACCAAGTTAACAATGCAGTGATCGCTGCAAACAAAGCGGCCACAGCTGCTAGAGTTGCTGCTGTGAAGGCTGTTCAGAACAGAATGGATGGAAAATTTTGTGAAACTTTTGTCTAA 1305 0.4123 METITTTTTQKKSQSKLTRTQSSLLNLTSSPTLRSSFQSLTSINDYYDEEDDKNNKKKIKKPQNRTGSTRITTPVIAVISFGFLGACSFFFYFSFLGSDEVPTSENLLLALIFIAVALYFASKNKRLINHGISVFKQWWEINVKRVGFGFGLSKSSESKPVQWFIGDSTTTTTTTTKKKSVREGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWIDGRYDGYGIESWARGSRYKGQYRKGMRHGYGVYRFYTGDSFSGEWCNGQSHGMGLQTCSDASTYVGQFKLGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHEGRRQGIGSYTFRNGDRRCGEWDAGNLKHPLPPQTDVVIRAIQAARKTAENAINLKRVEDQVNNAVIAANKAATAARVAAVKAVQNRMDGKFCETFV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02199 434 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 282 363 - -
Trre5g02199 434 Gene3D - 315 375 - -
Trre5g02199 434 Gene3D - 269 314 - -
Trre5g02199 434 Gene3D - 224 268 - -
Trre5g02199 434 Gene3D - 176 223 - -
Trre5g02199 434 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 11 408 - -
Trre5g02199 434 SMART morn 261 282 IPR003409 -
Trre5g02199 434 SMART morn 238 259 IPR003409 -
Trre5g02199 434 SMART morn 284 305 IPR003409 -
Trre5g02199 434 SMART morn 192 214 IPR003409 -
Trre5g02199 434 SMART morn 330 351 IPR003409 -
Trre5g02199 434 SMART morn 307 328 IPR003409 -
Trre5g02199 434 SMART morn 215 236 IPR003409 -
Trre5g02199 434 Pfam MORN repeat 263 282 IPR003409 -
Trre5g02199 434 Pfam MORN repeat 194 211 IPR003409 -
Trre5g02199 434 Pfam MORN repeat 286 308 IPR003409 -
Trre5g02199 434 Pfam MORN repeat 217 239 IPR003409 -
Trre5g02199 434 Pfam MORN repeat 240 261 IPR003409 -
Trre5g02199 434 Pfam MORN repeat 332 354 IPR003409 -
Trre5g02199 434 Pfam MORN repeat 309 330 IPR003409 -
Trre5g02199 434 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 223 268 - -
Trre5g02199 434 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 269 314 - -
Trre5g02199 434 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 188 281 - -
Trre5g02199 434 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 177 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02199 Trre-Chr5 16553544 16555378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02199 151 364 Acyl Lipid Metabolism Gene Families AT1G21980 33.178 4.23e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02199 - - cave:132183918 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02199 5 16553544 16555378 Trre5g02199 5 16553544 16555378 ECH