Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02194 ATGGGTTACTCAAAGGAACAGCTGCTTCAGAAGTTACAGGAGCTTAAGATTGAATTTTCCAGGTATGATCATCCAGTTGTTTTGACTGTTGAGGCTCAGGCAATGCATGTTGGAAAATTTGGTGGTGGTCTTAGTAAAAATTTATTTTTGAAGGATAAGAAAAACAGGTTTTATATTGTTTCTGCTTTAGCTGATACAAAAGTAGACCTGAAAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTCAGAATGGCACCCGAAGAGGCTTTAGGTGAATTACTTCAGGTACCCTTGGGGTGTGTGACACCATTTGCATTAGTGAATGAATCAGCACGAGATGTTTCGCTGCTATTAGATCAAGGATTCAAGACACAGGAGCATTGTTTCTTCCATCCATTGTCAAATGACACCTCCATATCTCTAAATGTGTCTGGTCTTGACAAATTTCTTACATCAATAGGAAGAGTTCCTGCATACGTTGATTTGGAGGCCAATCCTGCAGTGGGAAAAGATCAACCCCCTGATCTAGCCGCACTTGTACCATCCAGTGCAATAATTTTGCCTGATCAACCAGGAAAGCAATCATCTGCAGAAGTTCCTAAGGAAGGAAACCTTGTTTCTGGGGATAATAAGTCCAAGACTGTTCCAGCCAAAGTTGTCAAGCAATCCGTTGTCCTGAGTAAAACGAAGGGAACACCGGAAAAAACTGTTCAGTCAACAAGATCCTTTGCAGATGTTGGGAAATTAGTTGAAGAGATATTGAATAAAACATCAAAATTATTGGTTTCAGAGATCAATGAAGAAACTATAAAGACACACGGAGAGCAGCTGGGTACTACGTTATCTGACAAATTACAGAAAAACCTCAGCTCAGATTTTAAAAATCTCGCTATGATATTTAAGAACACTGCATATACAGAAGGGTACCATGCCGGTGTTCGCCAGCAGCCGAGGTGA 963 0.4091 MGYSKEQLLQKLQELKIEFSRYDHPVVLTVEAQAMHVGKFGGGLSKNLFLKDKKNRFYIVSALADTKVDLKVLSQRLGLGKGGLRMAPEEALGELLQVPLGCVTPFALVNESARDVSLLLDQGFKTQEHCFFHPLSNDTSISLNVSGLDKFLTSIGRVPAYVDLEANPAVGKDQPPDLAALVPSSAIILPDQPGKQSSAEVPKEGNLVSGDNKSKTVPAKVVKQSVVLSKTKGTPEKTVQSTRSFADVGKLVEEILNKTSKLLVSEINEETIKTHGEQLGTTLSDKLQKNLSSDFKNLAMIFKNTAYTEGYHAGVRQQPR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02194 320 Pfam Aminoacyl-tRNA editing domain 24 151 IPR007214 GO:0002161
Trre5g02194 320 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 319 IPR040285 -
Trre5g02194 320 MobiDBLite consensus disorder prediction 192 213 - -
Trre5g02194 320 SUPERFAMILY YbaK/ProRS associated domain 3 164 IPR036754 GO:0002161
Trre5g02194 320 Gene3D - 2 171 IPR036754 GO:0002161
Trre5g02194 320 CDD PrdX_deacylase 5 162 - -
Trre5g02194 320 FunFam Putative prolyl-tRNA synthetase 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02194 Trre-Chr5 16511621 16515727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02194 - - ahf:112764287 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02194 5 16511621 16515727 Trre5g02194 5 16511621 16515727 ECH