Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02191 ATGGCAAAATTCTTCAACCTAAGTTCTGTTACCAGAATCGCTCTGATTTTGTTACTATGCTTCAATTCTATTATTAATCTCCCTCAAACTAAAGCACTTTGGTTAACTATCCCTAGTCATGGAACAAAGTGCGTGTCACAGGAAATCCAAACACATGTTGTCGTTTTAGCTGATTACTATGTTGTTGCCGATAATATCAAGGGTCAACCACTTCCTACTATTTCTGCCAAGGTGACATCTCCATATGGAAATAATCTTCACCACAATGAAAATGTTACCCAAGGTCAATTTGCATTTACAACTACTGAGAGTGGAAACTACGTCGCATGCTTTTGGATGGATAGTAAAAATCTACAAGGTACTTCAATCAGCCTTGATTGGAAAACTGGAATCTCTGCCAAAGATTGGGACTCCGTTGCAAAAAAAGAAAAGATAGAGGGAGTTGAGCTTGAGCTAAGGAAACTTGAAGGAGCCGTGGAAGCCATCCACGAGAATCTGTTATATTTAAAGACTAGGGAAGCAGAGATGAGAGAAGTTAGTGAAGTAACAAATGGCAGAGTTGCTTGGTTCAGTATAATGTCTCTTGGCGTCTGCGTTTCAGTTTCGGTGTTACAGCTGGTGTATCTAAGACGCTACTTTCAAAAGAAGAAGCTCATATAG 660 0.3955 MAKFFNLSSVTRIALILLLCFNSIINLPQTKALWLTIPSHGTKCVSQEIQTHVVVLADYYVVADNIKGQPLPTISAKVTSPYGNNLHHNENVTQGQFAFTTTESGNYVACFWMDSKNLQGTSISLDWKTGISAKDWDSVAKKEKIEGVELELRKLEGAVEAIHENLLYLKTREAEMREVSEVTNGRVAWFSIMSLGVCVSVSVLQLVYLRRYFQKKKLI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02191 219 SMART EMP24_GP25L_2 32 214 IPR009038 -
Trre5g02191 219 Pfam emp24/gp25L/p24 family/GOLD 32 214 IPR009038 -
Trre5g02191 219 Coils Coil 145 165 - -
Trre5g02191 219 ProSiteProfiles GOLD domain profile. 42 154 IPR009038 -
Trre5g02191 219 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10 216 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02191 Trre-Chr5 16484211 16487075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02191 K20352 - gmx:100500676 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02191 5 16484211 16487075 Trre5g02191 5 16484211 16487075 ECH